Gene Dhaf_2919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2919 
Symbol 
ID7259927 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3129563 
End bp3130788 
Gene Length1226 bp 
Protein Length408 aa 
Translation table11 
GC content46% 
IMG OID643562837 
Producttransposase IS116/IS110/IS902 family protein 
Protein accessionYP_002459378 
Protein GI219668943 
COG category[L] Replication, recombination and repair 
COG ID[COG3547] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGCTA TTCTGGAATG CTGCGCGGGA CTGGATGTTC ATCAAGAAAC GGTGGTAGCC 
TGTATCCTCT TTGGTTCCTT GGAATCTAAG CCTAAAAAGA CGATCCGGAC GTTTAGTACG
ACCACATCTG ACCTTCTGGC GCTTACCGAT TGGTTGGAAG AAGAGAAATG CTCGCATGTC
GCCATGGAAA GTACCGGAGT GTATTGGAAA CCGGTTTGGA ATATTCTTGA GGCAGGGTCG
TTTCAACTGA GTTTGGCCAA TGCTCAACGC ATTAAGAACC TACCCGGGCG GAAAACGGAC
GTCAAAGATG CGGAATGGAT TGCCCAACTT CTTCGAAGCG GATTAATTGA AGGAAGCTTT
GTACCACCGG CGGAAATCCG TGATCTGAGA GACTTAACCC GATATCGGAA AAAACTCCTT
CAGGATGCAA CCCAAGAGAA AAACCGCATT CATAAAATTT TGCAGGATGC CAATATCAAG
ATCACCACCT ATATTTCCGA TATTTTCGGG GTTTCAGGAC GCAATATTAT GGAGTCCCTG
ATGGATGGAG AAGTGATTAC CGTAGAAAAG CTTAACCAGA TGGTGAAAGG TAAGGTTAAA
AGCAAGATAC CGGGTTTAGC GGATGCTTTA AATCATCGAC TGCGGAGCCA TCACCGGGAC
ATGATTCGAT ATTCATGGAG TCACTTGAAG TTTTTAGAAC AGAGCCTGAT TAACGTGGAG
CAGAAAATAA GTGAATGTAT GGCTCCATAC CAGCAAGAGG TCGAGCTATT AACCTCAATA
CCCGGTATAA ATCAGACGTC TTCAGCGATC ATGATCGCTG AGTTGGGGGC AGATATGTCT
GTCTTTCCTA CAGATAGTCA GCTGTCTTCC TGGGCTGGAG TATCACCCGG CAATAATGAA
AGCGCAGGTA AAAAAAAAGA GGGAGTGTTT CCGCAGGAAA CAAAGCGTTA AAAGCGGTAT
TATGTGAATG CGCATGGGCT GCTTCTAAAG TAAAAAACTC TCGTTTATCC GCAACCTATT
GGCGATGGGT TAAACGGATG GGTAAAAAGA AGGCTTTACT GGCTCTGGGC CATCTGATTC
TTCGGATTGC CTATCGGATT TTAGTGACGA GAGAAACCTA TAGGGAACTC GGAACAGAAT
ACATGATGGA GCGTGAGAGA CAGAAGGAAC AGCGTCTCAT CAGACAACTT CAAGCAAAGG
GCTATCAGGT TTTACAAGCC AGCTGA
 
Protein sequence
MDAILECCAG LDVHQETVVA CILFGSLESK PKKTIRTFST TTSDLLALTD WLEEEKCSHV 
AMESTGVYWK PVWNILEAGS FQLSLANAQR IKNLPGRKTD VKDAEWIAQL LRSGLIEGSF
VPPAEIRDLR DLTRYRKKLL QDATQEKNRI HKILQDANIK ITTYISDIFG VSGRNIMESL
MDGEVITVEK LNQMVKGKVK SKIPGLADAL NHRLRSHHRD MIRYSWSHLK FLEQSLINVE
QKISECMAPY QQEVELLTSI PGINQTSSAI MIAELGADMS VFPTDSQLSS WAGVSPGNNE
SAGKKKRGSV SAGNKALKAV LCECAWAASK VKNSRLSATY WRWVKRMGKK KALLALGHLI
LRIAYRILVT RETYRELGTE YMMERERQKE QRLIRQLQAK GYQVLQAS