| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2884 |
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| Symbol | |
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| ID | 7259892 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3093712 |
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| End bp | 3095316 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 643562802 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_002459343 |
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| Protein GI | 219668908 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.138594 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGACAATG TCAGTATCAT TAATATGCTG CTGGTTTTAT CCACCTTGGT GATATTATAT
TTCTTGTTGT TAATCGCCAA AAGAACGCGG AAAAAGCAAA TTCATTATGC TGTTTTAAGT
ATGACGGCCA GTATTCTCCT ATGGAATATC GCAGTACTAT TGTATATGAC GTTTGACAAT
GTCCCATGGA TACTGGCAAT ATGCGAGCGG CTGTACTTTT TGGGTACGAT TCTTGTATCA
ATTTCCATAT TATTTACCGG GTTAATATTT GCCCGAACCA AAATAAAATT CACATGGAAG
CATGGGTTGC TGTTTGTTGT CCCAGTCATC TCTATTGGGG TGCTGCTTAC CAATCAGAGT
CATCACTTGT TTTATACTGT CTTTAGCCTG ATACCCTCCA AGCAAAATTT TGGTATCTAT
TTTACGATAC ATACCATATA TTCCTATCTG TGTATAGGGA TTGGCTTGGC CTATCTTGTG
ATTTTTTCCA TAAAGAACTA TGGAGTTTTC TCCAAACAAT CCTCGTTAAT ATGTATTGGC
ATTATGATTG CGCTGATCAT GGACGCGATC AGCACATTTA AGATCTTTGA TTGGTCAACG
GCAATCGAAA ATATTGCCTT TGCCGTGACG ATCAGCTTTT TTGTCATAGC CACGGTTAAG
TTTGATTTTC TGAACGTAAT ACCCATCGCC TTGCAAACGG TTGTTGATTT GATTTCTGAC
AGCTACGTGG TGATTGATGA GGATTTTGAA ATCATTGATT ACAACCAAGC TTTTGTAAGC
GATTTTAGCG GGGTAGCCAG GAAAGTCGAC ATTATGGCAA TAATCAAAAA GAATTATAGT
GATCTTGATG TTAAGAGGTT CAAGGGCTTT TTGGACGAAG CTGTTCGTGA GCATAAAAAA
GTGAGCTTTG AAATCTCCAA GCCCAGGAAT GAAGCTATTG TCTATTATAG GGTGGAGATC
ACACCCATTT ATGTCAGCGG CAATCCCATA GGAACTATCA TTTTAAAAAA GAATATTACT
GAGCATAAAA ATAATCTGAA GGAGGTTATG CAGCTCAATG AGAGGCTGCA GAGTCTGGCA
ACCCGGGATT GGCTGACTCA GTCTTATAAT AGATATTTTT TTGATGAAAG ATTACAGCAG
GAGATTGACC TCGTGAACAG GCTGCAGGCA TACGGCCTGG AATCAGAAAA AAGTGTCAAT
AATTTTGGGT TGATCATGTT TGATATAGAC TATTTTAAAA ATTATAATGA TAATAATGGG
CATCTGGCGG GGGATGAGCT TTTACAGACA ATCGTTACGG TTGTTAAAGG GGTATTATAT
CCGACTGATA TATTATGCAG ATACGGCGGA GAAGAGTTTG CCGTTATTTG CTGCCATACC
TCAGAGAAAG GGTTTGAAAT AGCTGCGGAA AAGATCAGAA AGGCTGTGGA GGATTATGAT
TTCAGGTTTC AGGATAAACA GCCGGGTGGC AACCTGACAG TCAGCATTGG CGCAGCATAC
TGTTCGACCC CTAATGTCAA TAAAAAGGAT TTAATAACAA GAGCTGATAA TTATCTGTAT
TTAGCCAAAA GCACCGGAAG GAATAAGGTT GTTTTTAGTG AGTAA
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| Protein sequence | MDNVSIINML LVLSTLVILY FLLLIAKRTR KKQIHYAVLS MTASILLWNI AVLLYMTFDN
VPWILAICER LYFLGTILVS ISILFTGLIF ARTKIKFTWK HGLLFVVPVI SIGVLLTNQS
HHLFYTVFSL IPSKQNFGIY FTIHTIYSYL CIGIGLAYLV IFSIKNYGVF SKQSSLICIG
IMIALIMDAI STFKIFDWST AIENIAFAVT ISFFVIATVK FDFLNVIPIA LQTVVDLISD
SYVVIDEDFE IIDYNQAFVS DFSGVARKVD IMAIIKKNYS DLDVKRFKGF LDEAVREHKK
VSFEISKPRN EAIVYYRVEI TPIYVSGNPI GTIILKKNIT EHKNNLKEVM QLNERLQSLA
TRDWLTQSYN RYFFDERLQQ EIDLVNRLQA YGLESEKSVN NFGLIMFDID YFKNYNDNNG
HLAGDELLQT IVTVVKGVLY PTDILCRYGG EEFAVICCHT SEKGFEIAAE KIRKAVEDYD
FRFQDKQPGG NLTVSIGAAY CSTPNVNKKD LITRADNYLY LAKSTGRNKV VFSE
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