| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2866 |
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| Symbol | |
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| ID | 7259874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 3081726 |
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| End bp | 3083837 |
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| Gene Length | 2112 bp |
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| Protein Length | 703 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643562784 |
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| Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_002459325 |
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| Protein GI | 219668890 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGGCT TTATTTCGAG TGGTCTTTCT TTGCTGGACA GCCAGGAATT GATTCTCTCC
TCCCTTTATC TTGATGAAGA GACCTTATTG GCTGATGCTC TGCAGATCAT TTTAAAAGAG
GAACGAACTC ATCTGCCGGT AGTAAGCAAA GAGAAAAAAT TTCTGGGTGT TTTAGGGACT
GCCGATATTA TGGAAAGTTT AAGCCAGGGG AAGTTTGCTC CCAAGGCGCC GATTACATCC
TATATACGGC CGGTGGAGTG GCTACTTCCG GAGGAGAACA GCCTGCTTTT TAATTTCAAT
GTCTTGATTA CCGAAGGATG GCCCACCGCC TTTGTGGTTG ACAGCAAAGG CGAGTATCAA
GGTGAATTCA AATTTCATGA TAATCTGTTC CTGTTGTACC AACTGCTGAA CGACCTGGAT
TTTTATATCA GCCAAACCAT CGAAGCTGTT CATAATGCCG TGGTGGCTAT TGATGCTCAG
GGGCGCATCG TTTTCTTTAA CCCTTCCGCG GAAAAATTGC TGGGCTTTCA TGCTGAAGAA
GTCCTCGGCA AACCGATCAA AAACTTTTTT CCGGACTCCT TAACCTTTAA AGCGCTGGCA
ACAGGTGAAG AACTGCGGGG CATCCCTATG AGCTACGGTG AGCTTAACAC CAAGGCAGAC
TTCCTGCCCA TCATCCTGGG GCACAAGGTT CTGGGCGCAG TAGCCGTGTT TAAAGATATT
ACCGAACTGG AAGAGGTAAG CCATCGTCTG AATTCCAACG AAAAGCTGAT GGCCACACTG
GAGGCGGTGG TCGAGAATTC TTATGAAGGC ATGGTCGTCA TCGATGATCA AGAGAATATT
GTCCTGATGA ACCAATTCTT TTTGGATGTC ATCGGGGTCA AAGTGCAGGA TGTGATCGGC
AAAAAGATTA ATGATATCAG CCCTAATTCC AGTCTGCCTC AGACCTTGAA ATCAGGGAAA
GCCCAATTCG GCGAGACCTG GCATCTTAAG GGGCGTGATT TTATCATCAT GCGAGTCCCC
ATTGAACGGG AAGGCAAAGT CGTGGGGGCC TTGGCCAAGA CTCTTTTCAA AAACATGGAA
ATCGCCAAAA TGTTTGCCAA AAAAGTCATG CGCTTGGAAG AAAACCTCGC TTACTATAAA
GAAGAGTTGG GCAAATTCCA TTCCTCCCAA TTCGTTTTTG ATGATATTAT CGGGGAAAGT
CCCAGAATGA AAAAAGCCAA ATCCTTAGCA CATCGTGCCT CCCAAACAAC CTCCACCATT
CTGATCCTGG GTGAAAGCGG TACAGGGAAA GAAGTCTTTT CCCATGCTAT TCATAAATCA
AGTATTCGCA GCAACGGACC TTATATCAAA GTGAATTGTG CGGCATTGCC GGAAGACCTG
CTGGAATCAG AACTTTTTGG TTATGATGAA GGTGCGTTTA CGGGGGCCCG CAAAGGCGGC
AAGCCCGGTA AATTTGAACT TGCGGACAAA GGGACGATCT TTCTTGATGA GATCGGGGAT
ATGTCTCTGG GTATGCAGGC TAAACTGCTG CGGGTGCTGC AGGAACGTGA ACTTGAGCGT
TTGGGGGGGA CAGAACCCAT CAAAGTGGAT GTGCGGATTA TTGCCGCCAC GAACAGGGAT
CTGCACAAAA TGGTGATGGA GCATAAATTC CGCCTTGATC TTTATTACCG TCTCAATGTT
CTGACCATCG ATCTGCCCCC TTTAAGAGAA CGCAAAGAGG ACATCGGCTT TATTGCCAGA
GGACTTATTG AAAAAATCAA TAAGCGACTG GGTACGGACA TCCAGGGGGT GAGACCGGAA
AGCATTACCC ACTTGTGTGC TTATGACTGG CCGGGCAATA TTCGTGAACT GGAGAATATC
CTGGAACGGG CCATCGTCAT TTGTGATGAA GCCTGGATTT TGCCCAAGCA TTTGGCTTTG
CCGGGAGTTA TGGAAACCAT AACCTTAGGT GCGGAACAAA CCCTGGAGTA TGCTTTACAA
GCCGCAGAAC GTGAGATCCT TGATAAGACT CTCCGCCGCG TTCAGGGCAA CAAGGTACAG
GCTGCCCGAA TCCTGGGCAT TCACCGCTCC GTGCTCTATA AAAAGCTGGC TAAGTACAAT
ATTCAAGGGT AA
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| Protein sequence | MNGFISSGLS LLDSQELILS SLYLDEETLL ADALQIILKE ERTHLPVVSK EKKFLGVLGT
ADIMESLSQG KFAPKAPITS YIRPVEWLLP EENSLLFNFN VLITEGWPTA FVVDSKGEYQ
GEFKFHDNLF LLYQLLNDLD FYISQTIEAV HNAVVAIDAQ GRIVFFNPSA EKLLGFHAEE
VLGKPIKNFF PDSLTFKALA TGEELRGIPM SYGELNTKAD FLPIILGHKV LGAVAVFKDI
TELEEVSHRL NSNEKLMATL EAVVENSYEG MVVIDDQENI VLMNQFFLDV IGVKVQDVIG
KKINDISPNS SLPQTLKSGK AQFGETWHLK GRDFIIMRVP IEREGKVVGA LAKTLFKNME
IAKMFAKKVM RLEENLAYYK EELGKFHSSQ FVFDDIIGES PRMKKAKSLA HRASQTTSTI
LILGESGTGK EVFSHAIHKS SIRSNGPYIK VNCAALPEDL LESELFGYDE GAFTGARKGG
KPGKFELADK GTIFLDEIGD MSLGMQAKLL RVLQERELER LGGTEPIKVD VRIIAATNRD
LHKMVMEHKF RLDLYYRLNV LTIDLPPLRE RKEDIGFIAR GLIEKINKRL GTDIQGVRPE
SITHLCAYDW PGNIRELENI LERAIVICDE AWILPKHLAL PGVMETITLG AEQTLEYALQ
AAEREILDKT LRRVQGNKVQ AARILGIHRS VLYKKLAKYN IQG
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