Gene Dhaf_2860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2860 
Symbol 
ID7259868 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3074076 
End bp3076175 
Gene Length2100 bp 
Protein Length699 aa 
Translation table11 
GC content49% 
IMG OID643562778 
Productprotein of unknown function DUF224 cysteine-rich region domain protein 
Protein accessionYP_002459319 
Protein GI219668884 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase
[COG2181] Nitrate reductase gamma subunit 
TIGRFAM ID[TIGR00351] respiratory nitrate reductase, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACAC GGGAGCTTTA TTGGAATATT GAATATCACT GGCTGATTTA CCCTATGCTG 
GTCATAGCTC TCGGTTTTTT CTGCTATGGT TTTTATCAGC GTTATCAGCT GTGGCAGATA
GGACGGCCTG AGAACCGCAG GCAGAATATC GGCAAAAGAA TCGGAGATGT CCTTCTTTAT
GGCTTAGGAC ATAAAAGAAT CTTAAAAGAT GCTTTTCCGG GAATCATGCA CCTTTTGATG
TTCTGGGGGT TTGCCCTGCT GTTCTTTGCC ACGATGATTG TAGCCTTGCA GGCTGACTTA
GGGATCAATA TGTTTAAAGG CGGGCTCTAT ATCTTTATTA AGGTAACCGC CAATGCCTTT
GGACTGTTAG CCATTATCGG CTGTCTGATG GCGATTTGGC GGCGTTATGG TCAGCGTCCG
GATCGCCTCG ATAATAAAAA GGATGACGCC TTTGTTTTAG CCCTTATCCT TACGATCCTG
GTCACCGGTT TTGTCATTCA GGCTGTGCGT ATGGCGGCAG TTGAAGATCC CTGGGGCATG
TATGCCTTCA TCGGCTATGC CATGGCACCC CTTTTCAAGG GCTTGAGCAA TTCAACCCTG
GAAGGAATTC ATGCCTTTCT CTGGTGGTTC CATTTCATTT TAGTGATGGT CTTTTTTGGG
TATTTTCCTT ACTCCAAGCT TTCCCATATC CTTTTGGCCC CTGCCAATCA GTTTTTGCGG
CATCATGGCC CCATCGGCAT CCCGGAGAAT ATCGATTTTG AGGATGAGAG CCTGGAGACT
TATGGCAAAA GCAAGCTGGG TGAGTTCAGC TGGAAGACCC TTTTTAATAC GGATGCCTGT
TTGCGCTGCG GTAGATGCCA GGATAACTGT CCGGCTTATT TAAGCGGCAA ACACCTTAAC
CCCAAAAAGG TGATTCAGGA TATGGGCGCT TATCTGGAAG AGATGGGTCA GGCACTGAAA
ACCTACCGGG CGGCCAATCC GGCCCTTGCC GTGGCCGGCT CCGGAAATGA GGTGGCGGCT
GCGGCTGAAG CTGACACTGG GGCCCAAGTT CCCAGTGAAG AAGAGTTGGG CTTGCGCTCT
CTCATCGGTG ATGTGATTGC CGAAGATGAT CTTTGGGACT GTACCACCTG CCGTTCCTGT
GAAGAACAAT GTCCGATCTT TGTTGAGCAT GTGGATAAAA CCATTGATAT GCGCCGTAAT
CTGGTGCTTA TGGAATCGCG TTTTCCCGCT GAGGCTCAGC TGGCTTTCCG CAATATGGAG
AACAACAGCA ATCCCTGGGG AATCGGCTGG TCTTCACGGG GGGACTTTTT GCAAAGTGTA
GGATGTTCGA CTATAGAAGA AAATCCAGAT GCTGAAATTC TTTACTTTCC AGGTTGTTCA
GGATCCTTTG ATGCACGGAA TCAGAAGGTC TCGGCAGCCT TGGTGAAGCT CCTGAAGGCC
GCACAAGTTA ATTTTGCTAT TTTAGGCAGT GAGGAGAAAT GTTGTGGAGA CTCAGCCCGC
CGCCTGGGAA ATGAATATCT TTTTCAGGCC TTGGCTCAGG AAAATATTGA GACGATGAAT
GGCTACGGGG TAAAAACCAT CGTTACTCAA TGTCCTCACT GTTTTAATAC CCTTAAGAAC
GAATATCCTG AGTTTGGCGG GAATTACCGG GTGCTCCACC ATACCGAATA TTTAAACGAA
CTATTAGCCG CCGGTAGATT AAAGCTTCAT AAAGCAGGCA GTGGTTCGGA AAGGGGGGGA
AACAGTCAAT CCGTTACCTA TCACGACTCC TGTTATCTGG GCCGCTATAA CACGATTTAC
ACAGAACCCA GAACCTTGCT GCAAGCTGCC GGTTTCCGGA TTACCGAAAT GTCCCGTCAT
CATGAGAAGA GTTTTTGCTG CGGTGCCGGC GGCGGAAGAA TGTGGCTGGA AGAACATCAG
GGCCAACGTA TCAATGAGAT GCGCACGGAC GAGGCCATGG CGGCAGGCGC AGAAGTGGTG
AGCACGGGAT GCCCGTTCTG CTTAACCATG ATCAGCGACG GCATAGCTGC CCGTGAAGCC
GTGGAGAGTG TGAAGGTATT GGATATTGCA GAGATCCTTG TCGAAAGAAT ATCGGAATAA
 
Protein sequence
MATRELYWNI EYHWLIYPML VIALGFFCYG FYQRYQLWQI GRPENRRQNI GKRIGDVLLY 
GLGHKRILKD AFPGIMHLLM FWGFALLFFA TMIVALQADL GINMFKGGLY IFIKVTANAF
GLLAIIGCLM AIWRRYGQRP DRLDNKKDDA FVLALILTIL VTGFVIQAVR MAAVEDPWGM
YAFIGYAMAP LFKGLSNSTL EGIHAFLWWF HFILVMVFFG YFPYSKLSHI LLAPANQFLR
HHGPIGIPEN IDFEDESLET YGKSKLGEFS WKTLFNTDAC LRCGRCQDNC PAYLSGKHLN
PKKVIQDMGA YLEEMGQALK TYRAANPALA VAGSGNEVAA AAEADTGAQV PSEEELGLRS
LIGDVIAEDD LWDCTTCRSC EEQCPIFVEH VDKTIDMRRN LVLMESRFPA EAQLAFRNME
NNSNPWGIGW SSRGDFLQSV GCSTIEENPD AEILYFPGCS GSFDARNQKV SAALVKLLKA
AQVNFAILGS EEKCCGDSAR RLGNEYLFQA LAQENIETMN GYGVKTIVTQ CPHCFNTLKN
EYPEFGGNYR VLHHTEYLNE LLAAGRLKLH KAGSGSERGG NSQSVTYHDS CYLGRYNTIY
TEPRTLLQAA GFRITEMSRH HEKSFCCGAG GGRMWLEEHQ GQRINEMRTD EAMAAGAEVV
STGCPFCLTM ISDGIAAREA VESVKVLDIA EILVERISE