Gene Dhaf_2849 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2849 
Symbol 
ID7259857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3063808 
End bp3065595 
Gene Length1788 bp 
Protein Length595 aa 
Translation table11 
GC content51% 
IMG OID643562767 
ProductABC transporter related 
Protein accessionYP_002459308 
Protein GI219668873 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000104844 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTTAT TTATAGATTT AATGTGGTTT TTTAAGAAGG AAAAATTGAG TTATATTACC 
GGAATTATGC TGCTCATCGT CCTAGCAGCC ATCAATCTTT GCCCGCCCTA TATTGTCGGC
AGGGTCGTGG ATGGAGTAAC CAACCGGACC TTAACCCCGG AAATCCTTTG GCCTTGGCTC
TTGATCCTCT GCGGCCTGGG TATTTTATCC TACATCCTTC GCTACAGCTG GCGTATCCTG
ATTTTCGGAG CGGCGGCCCG CTTAAGCCGG TTGCTGCGCC AACAGCTTTT TAAGCATTTT
ACCCGTATGT CACCCAGCTT TTATCAAAAG TACCGGACCG GGGATTTGAT GGCCCATGCT
ACCAATGATA TTCAAGCCAT TGAAACCACT GCCGGGATGG GGGTACTTAC CTTGGTGGAC
TCCCTGGTCA CAGGCGGTTT TGTCGTCTTC TCCATGGCCG CTTTCCTAAG CTGGAAATTG
ACCCTCATTA CTTTGCTGCC TATGCCGGTT ATGGCCTGGG TCTCCAGTTA TTACGGCACA
TTGCTTCATG AGCGTTTCTT CAAGGCTCAG GAGGCTTTCG GCGATCTTAA TGATAAGGTT
CAGGAAAATA TCTCCGGAGT ACGTGTCGTG AAAGCCTTTG GTCAGGAAGA AGTGGAGATT
GAGTCCTTCC GCAGGCTGTC CGATGATGTA GTCAAAAAGA ATCAGGCGGT GGCTGTGGTG
GATTCCCTCT ATGATCCGTC GATTATGCTG ATTGTGGGAC TATCCTTTTT TCTGGCCGTT
TCCTTTGGCG CCTATGAAGT GATCCATCTC CGGCTGACCC TGGGCCAGCT TACTCAATTC
ACCCTTTATC TGGGACAGTT TATTTGGCCG ATGCTGGCCT TTGGCTGGCT GTTCAATATT
ATGGAACGGG GCAGAGCTTC CTATGATCGG GTGCAGGCTT TGCTGGGGGT GGAGTCCGAG
GTTCAGGATC AGGTTTCCCT ACAGGGAGCC CCTGACGGAA GCAGGGCAGA GCTTAGGCAA
AGTGTTAAGG GGGATATTTA CTGCGCTCTT GAGCAATTTA CCTATCCCGG TCAGACCAAG
CCCGAGCTGA AAAGGATCCA TTTCACCCTT AAAGAAGGGC AGACCCTGGG CATCGTGGGC
AAGACCGGCA GCGGCAAAAC CACCCTTTTC CGGGTCCTCC TTCGTGAGTT TGCGGGAATG
ACAGGAGAAA TTCGTATTGG CGGTGTCTCT ATTGAGGAGA TCCCTTTGGA TAGCTTGCGG
GGAATCTTTG GTTATGTCCC CCAGGAACAC TTTCTTTTTT CCACCACCCT GGCCGAAAAT
ATTGCTTTGG GGAAACCCCA GGCCCAGCTC TCGGAAATTG AGAAGGCTGC TAAAACAGCT
TGTATTCATG AAGATATCCA GCGGTTTGAA GCGGCCTATG GGACCCTGGT CGGGGATCGG
GGAGTCACCT TATCAGGAGG GCAAAAACAG CGGATTTCCA TTGCCCGAGC TTTGCTGCTC
GATCCAAAAA TATTGATTCT TGATGACTCT TTATCGGCTG TGGATGCCAA GACGGAAAAA
CAAATCCTCC TGGAGCTTAA GGGCAACCGC AGTCAAAAAA CCACCTTGAT CTCGGCCCAC
CGCCTCAGTG CGGTTGAGCA TGCCGATTTG ATTTTGGTCC TTCAGAATGG AGAAATAATA
GAGCGGGGCA GCCATGCCGA ATTAATGGAG CATCAGGGCT GGTATGCTGA AACCTATCAG
GCTCAGCAAC TGGAAAGTTT GATCGAAGAG GGAGGCGGAC TGGCATGA
 
Protein sequence
MRLFIDLMWF FKKEKLSYIT GIMLLIVLAA INLCPPYIVG RVVDGVTNRT LTPEILWPWL 
LILCGLGILS YILRYSWRIL IFGAAARLSR LLRQQLFKHF TRMSPSFYQK YRTGDLMAHA
TNDIQAIETT AGMGVLTLVD SLVTGGFVVF SMAAFLSWKL TLITLLPMPV MAWVSSYYGT
LLHERFFKAQ EAFGDLNDKV QENISGVRVV KAFGQEEVEI ESFRRLSDDV VKKNQAVAVV
DSLYDPSIML IVGLSFFLAV SFGAYEVIHL RLTLGQLTQF TLYLGQFIWP MLAFGWLFNI
MERGRASYDR VQALLGVESE VQDQVSLQGA PDGSRAELRQ SVKGDIYCAL EQFTYPGQTK
PELKRIHFTL KEGQTLGIVG KTGSGKTTLF RVLLREFAGM TGEIRIGGVS IEEIPLDSLR
GIFGYVPQEH FLFSTTLAEN IALGKPQAQL SEIEKAAKTA CIHEDIQRFE AAYGTLVGDR
GVTLSGGQKQ RISIARALLL DPKILILDDS LSAVDAKTEK QILLELKGNR SQKTTLISAH
RLSAVEHADL ILVLQNGEII ERGSHAELME HQGWYAETYQ AQQLESLIEE GGGLA