Gene Dhaf_2838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2838 
Symbol 
ID7259846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp3055205 
End bp3055714 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content46% 
IMG OID643562757 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002459298 
Protein GI219668863 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.0120302 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAAGCGG ACTCCTTTGA TGAGATTTAT GAAGAGCTTT TTCCTATTCT TTACCGTTTT 
GTACGTTTGC GGGTACCGCA AAGTGATGTT GAGGATGTAA CCGCTGAAGT GATTACTAAA
ATCTGGCGAG CATTGCCTAA TTTTGAGGGG AAAAGTACCC TGAAATCCTG GGCGCTCCGC
ATCGCTTATC ATCATATTGC CGACTTCTAC CGAACCCGCA AGGGGAAAGG GATGCAAATA
GTATCGTTAA GTGAGGAAAT AAAATCTACC CAGGCGACAG ATGATCATAG TGACCATTTA
TTGACCGTGC TGAGCGTAAG CGAAACACTG GCCAAGCTTT CTGAACAACA AGTGGCAGTG
ATACAACTCA GGCTTATTGA AGGATTCAGT GCCATCGAAG TAGCTCAGAT TCTGGGCATA
ACCCAGCAAG CTGTGGATAG TCTCCTGTAT CGAGCAAAGA AGAGCTTCCG GAAGTATTAC
GAGTTGGAGA ATGCAGGGGG AATTCGATGA
 
Protein sequence
MQADSFDEIY EELFPILYRF VRLRVPQSDV EDVTAEVITK IWRALPNFEG KSTLKSWALR 
IAYHHIADFY RTRKGKGMQI VSLSEEIKST QATDDHSDHL LTVLSVSETL AKLSEQQVAV
IQLRLIEGFS AIEVAQILGI TQQAVDSLLY RAKKSFRKYY ELENAGGIR