Gene Dhaf_2828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2828 
Symbol 
ID7259836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp3038117 
End bp3039142 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content48% 
IMG OID643562747 
Productprotein of unknown function DUF534 
Protein accessionYP_002459288 
Protein GI219668853 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000000000067856 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG GTAGTTTAAG AAGAATGTTG GGAATTGGTT TAAGTCTTGT CTTGGCACTG 
GGTCTGGCCG GATGTGGCGG TACTGCGCCA AGCACTAGTG AAACCCCTCA GGGAACAGGG 
CAAGGTTCTT CTGAAGAGAA ACAAGTGAAG ATTGGGATTA TCCAGATTGT CGAGCATCCT 
GCTTTAGACG CTGCTCGGCA GGGCTTTTTG GATACCTTGA AGGCTAATGG CTATGAAGAA 
GGCAAGAATT TGAAATTAGT ATATCAAAAC GCTCAAAACG ATCAATCCAT GCTCAATTCG 
ATCGCTCAAC AGTTTGCCAC CAGTGATCTC GATCTTATTC TGGCTATTGC TACTCCTTCA 
GCACAAGCTA TGGCCAGCGC CACCGATGAG ATCCCCATTT TGATTACAGC CGTTACCGAT 
CCTGTGGAAG CAAAACTGGT TGACAGTATG GATAAGCCGG GCGGCAACAT ATCCGGTACA 
ACAGATATGA ACCCCATTAA AGAACAATTG GACCTTTTGA AAAAGCTGGT TCCCGATGCT 
AAGACCGTTG GGGTAATCTA TAACGCCGCT GAGGTTAACT CTGAAGTTCA AGTGCGCATT 
GTCAAGGAAG AAGCCCCTGC CCTGGGTCTG GAAATTGTTG AAGCCACCGT ATCTTCCAGT 
GCCGACGTTC TGCAGGCAGC CCAATCCTTG ATCGGAAAAG TCAACGCTAT TTACGTTCCT 
ACCGATAATA TGGTGGTATC TGCCGCTCAA TCCGTCGTTC AAGTGGCCAA CGAAAATAAG 
ATTCCCCTCA TTTCCGGGGA AAGCAGCGTT GTCGATGCCG GCGGACTGGG AACCATTGGT 
ATCAACTACA CGAACTTAGG GGCACAGACC GGTGAAATGG CTCTCCGCAT CCTTGATGGG 
GCTAAGCCTG CCGATATGCC TGTGGAAGGT CAGAAAAACT TCGATATCGT CTTAAATCAA 
GAAGCGATTG ACTTGCTCGG AATCGAAGTC CCTGCCGACA TTAAGAGCAA AGCTACCATT 
AAATAA
 
Protein sequence
MKKGSLRRML GIGLSLVLAL GLAGCGGTAP STSETPQGTG QGSSEEKQVK IGIIQIVEHP 
ALDAARQGFL DTLKANGYEE GKNLKLVYQN AQNDQSMLNS IAQQFATSDL DLILAIATPS 
AQAMASATDE IPILITAVTD PVEAKLVDSM DKPGGNISGT TDMNPIKEQL DLLKKLVPDA 
KTVGVIYNAA EVNSEVQVRI VKEEAPALGL EIVEATVSSS ADVLQAAQSL IGKVNAIYVP 
TDNMVVSAAQ SVVQVANENK IPLISGESSV VDAGGLGTIG INYTNLGAQT GEMALRILDG 
AKPADMPVEG QKNFDIVLNQ EAIDLLGIEV PADIKSKATI K