| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2827 |
|---|
| Symbol | |
|---|
| ID | 7259835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 3037318 |
|---|
| End bp | 3037710 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643562746 |
|---|
| Product | Peptidoglycan-binding LysM |
|---|
| Protein accession | YP_002459287 |
|---|
| Protein GI | 219668852 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1388] FOG: LysM repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0000000797997 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCATC CGATGAACAT GCAAAATGGA TATATGGGCC AGAATCAATA TTTTCCTCAG
GGGGGCTTTG CCACTTTAGA TCCTAATTGT TGCCCTGGCC AAGTGACAAT GGATGCCGGC
CAGCCTTATC AATCCTGTTA TGGACAGGAA AGTATGCATG GTATGCACCA CAACCCTCAT
CATTGCTGCG TGCCGCCCTG TCCGCCCCCT TGCCCCCCGC CTTGTCCGCC GCCGGCACCG
GAACCGGTCA CCTATGTTGT CAGAAAAGGG GACAGCGTTT ATAAGATAGC TCAGCAATTC
GGCACGACGA TGCAAGCGAT TATCCTTGCC AACAATCTCA CTAACCCCGA TCTGATTTTC
CCTGGTCAGG TTTTCATTAT CCCCAATGCA TAA
|
|---|
| Protein sequence | MNHPMNMQNG YMGQNQYFPQ GGFATLDPNC CPGQVTMDAG QPYQSCYGQE SMHGMHHNPH
HCCVPPCPPP CPPPCPPPAP EPVTYVVRKG DSVYKIAQQF GTTMQAIILA NNLTNPDLIF
PGQVFIIPNA
|
|---|
| |