Gene Dhaf_2810 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2810 
Symbol 
ID7259818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp3017903 
End bp3019111 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content52% 
IMG OID643562729 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_002459270 
Protein GI219668835 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0568847 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTTC GCTTTAATAC GATTGAAGAA GCCATCGAAG ACATCCGCCA AGGCAAAATT 
ATTGTCGTCG TGGATGACGA GGAAAGAGAA AACGAAGGGG ATCTGCTGAT GGCCGCAGAG 
AAAGCAACCC CTGAGGCGAT CAATTTTATG GCCACCCATG GCCGGGGTTT AATCTGTGTC 
CCCATGACCG CCGAGCGCAT TCAAGCCTTA AATCTTGAAC CCATGGTAAC CCACAATACG 
GATCCCCATG GAACCGCCTT TACCGTGAGT GTGGATGGCT GCGACTGCAC TACGGGAATC 
TCCGCTTTTG AGCGGGCCAA TACGGTAAAA GTCCTCCTTG ATCCTCACAG CCGCCCCGAG 
AATCTCCGCC GTCCCGGACA TATCTTCCCT CTCAAAGCCC GGGAAGGAGG GGTCCTGGTC 
CGCGCCGGTC ATACAGAAGG CGCCGTTGAT CTTGCCCGCT TGGCAGGCTT TCAACCGGCA 
GGGGTCATTT GCGAAATCTT GAAAGACGAC GGCACCATGG CAAGGGTTCC CGACCTCATG 
GAATTCGTTA AAAAACACGA TCTCAAAATG GTTACCATTA AAGATCTCAT TCATTTCCGA 
CGCCAAAAAG AAAAATTAGT GGAACGGGTG GTCGGTATTG AACTCCCTAC AGACTTTGGG 
GACTTCAAAG CAGTGGGCTA TCGGAGTTTA TTGGATGGAC AAGAGCATAT TGCCCTGGTC 
AAGGGGGATG TGGACGATGG TGAGCCGGTG CTGGTAAGGG TCCACTCAGA ATGCCTGACC 
GGAGATGTTT TTCATTCCCG CCGCTGTGAC TGCGGCGAGC AGCTTTCTGC CGCTCTGGAA 
AGCATTCAAA AAGAAGGCCG GGGAGTCTTG CTCTATATGC GCCAGGAAGG CCGGGGCATT 
GGGCTGCTCA ATAAGTTGAA GGCCTATAAA TTGCAGGAAG AAGGCAAAGA TACTGTGGAA 
GCTAATCTTG CCTTGGGTTT CCCTGCCGAC CTCAGGGATT ACGGCGTAGG AGCTCAGATT 
CTGGTGGACT TAGGCATCCG CAAGGTACGG CTGATGACCA ATAACCCCCG CAAAATCGTC 
GGTTTGGAAG GCTATGGCCT GGAGATTCAG GAGCGCGTTT CCATGGAAAT GCCGGTTAAG 
CCTGAAAACC AGCATTATCT CCACACCAAG AAAATTAAAT TGGGTCATTA CCTGCCCGGC 
GTTCGTTAG
 
Protein sequence
MEFRFNTIEE AIEDIRQGKI IVVVDDEERE NEGDLLMAAE KATPEAINFM ATHGRGLICV 
PMTAERIQAL NLEPMVTHNT DPHGTAFTVS VDGCDCTTGI SAFERANTVK VLLDPHSRPE 
NLRRPGHIFP LKAREGGVLV RAGHTEGAVD LARLAGFQPA GVICEILKDD GTMARVPDLM 
EFVKKHDLKM VTIKDLIHFR RQKEKLVERV VGIELPTDFG DFKAVGYRSL LDGQEHIALV 
KGDVDDGEPV LVRVHSECLT GDVFHSRRCD CGEQLSAALE SIQKEGRGVL LYMRQEGRGI 
GLLNKLKAYK LQEEGKDTVE ANLALGFPAD LRDYGVGAQI LVDLGIRKVR LMTNNPRKIV 
GLEGYGLEIQ ERVSMEMPVK PENQHYLHTK KIKLGHYLPG VR