| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2752 |
|---|
| Symbol | |
|---|
| ID | 7259759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 2952443 |
|---|
| End bp | 2953891 |
|---|
| Gene Length | 1449 bp |
|---|
| Protein Length | 482 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643562671 |
|---|
| Product | Peptidase M23 |
|---|
| Protein accession | YP_002459213 |
|---|
| Protein GI | 219668778 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.76088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCCAATT GGAAAGGGGG CTTAGACGGT ATTAGTCAGA GCATAAAAGA GAACCTGACT
AAGGTGTTGG GAAGGTTTTC TGAGTCAAAG GTAGCTTGGG AATTTCCCAA AATCGTCCTT
GGGGTGATGG GACTGATGGT AGTATTAGGT GGCGGCCTTT ATTACAGCCA GACAACCACG
GCAGCCGCAC TGATGCTTAA TGGTCAGGAA ATTGGGTATG TAGCATCCCC GGACGCAGGC
AAACAATTGG TGGATTCCAT CCTTGTTTCC CAAGGGGATT CCTCAGATCT TGTTGCAAAG
ACTCATGATC AAATCGAGTT CCAGGACACG CGGATCAGGA AAGGGACTCT TCAGGAGAAC
TCTGTAACAG AAGCTAAGCT GAACAATTTA ATAAGTACAT ATTTTGAAGG AGTGCAATTT
TCTATCGAAG ATGCTCCTAT AGCAATCCTG CCCAGTGAAG ACGATTTCCA GAAGATTCTC
CAAGCTTATC AAGAAATCTA TGCCAAACCC AGTGAGAATA ATACCATCAC TTCCGTAGAA
TTCAAAGAAC TGATTTCTTC TCAGCCTGTG GAAGTGCAGC AGGCGGAATT TAGTTCGCCG
GAGATGGTTC TGGAAACCTT AAGGAAAGGA CATGAAGCCA GAACAGAGTA TGTGGTTCAA
CCCAATGACT CCTGGTGGCT AATCGCCCGC AAAAACGATA TGCTGACCAA GGAAGTATTG
GCCGGGAACC CGGGTATGGA TGAAGATAAG ACTCTTCAGG TTGGTGAAAA AATAAACTTG
GTCAAAGTGA CCCCTTATCT CACCGTAGTA AGTAAGGGAA TCTATACCGG TACCGAGACG
ATTCCCTTTG ATGTTGAATC GAAAACCGAT TATAGTTTGC CCAGCGGTTC TTCAGTGGTT
CGCCAGGAGG GAAGCGATGG CAGCAAAAAA GTCACCTATT CCTATGTTCA GGAAAACGGC
AAGAACATAG AAAAAGTAGT GTTGGAAGAA AAAATCATCC AACAGCCGGT GACTCAAGTT
ATTGCCAAAG GACCCACCTA CGCATCGGCC AATGTGGCCC TTTCCCGGGG AAGCGGCAAA
GTCAGCGGCT TGGGTTGGCC TCTCAGAGGA GGGCTTAATT CCTATTACGG CTACCGCTGG
GGAAGTTTTC ATACCGGTTT GGATATTGGC GGCGATACAG GACAGCCTTT TGTGGCTGCA
GCCGGCGGCA CAGTATCCTC GGTGGGCTGG AGCGGCGGCT ATGGCAATAT GATTCTTATC
GATCATGGCA ATGGTGTGGC TACCCGTTAT GCCCACGCCT CCAAAGTAAG CGTTTCCAAT
GGACAACAAA TAAGCAAAGG GGAGTCCATA GGCCTTGTGG GCTCAACCGG CCGTTCAACA
GGACCTCATT TGCACTTTGA AGTGATCATT AATGGCGATA CAGTCAATCC TCTTAACTAT
TTACCGTAA
|
|---|
| Protein sequence | MSNWKGGLDG ISQSIKENLT KVLGRFSESK VAWEFPKIVL GVMGLMVVLG GGLYYSQTTT
AAALMLNGQE IGYVASPDAG KQLVDSILVS QGDSSDLVAK THDQIEFQDT RIRKGTLQEN
SVTEAKLNNL ISTYFEGVQF SIEDAPIAIL PSEDDFQKIL QAYQEIYAKP SENNTITSVE
FKELISSQPV EVQQAEFSSP EMVLETLRKG HEARTEYVVQ PNDSWWLIAR KNDMLTKEVL
AGNPGMDEDK TLQVGEKINL VKVTPYLTVV SKGIYTGTET IPFDVESKTD YSLPSGSSVV
RQEGSDGSKK VTYSYVQENG KNIEKVVLEE KIIQQPVTQV IAKGPTYASA NVALSRGSGK
VSGLGWPLRG GLNSYYGYRW GSFHTGLDIG GDTGQPFVAA AGGTVSSVGW SGGYGNMILI
DHGNGVATRY AHASKVSVSN GQQISKGESI GLVGSTGRST GPHLHFEVII NGDTVNPLNY
LP
|
|---|
| |