Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2726 |
Symbol | |
ID | 7259733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 2923920 |
End bp | 2925752 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643562646 |
Product | GTP-binding protein TypA |
Protein accession | YP_002459188 |
Protein GI | 219668753 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000416376 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAA TGAATATTCG TAATATCGCC ATCATCGCTC ACGTTGACCA CGGCAAAACA ACCCTAGTCG ATGCAATGCT CAGACAAAGC GGAACCTTCC GCGCCAATCA AAATGTTATG GAGCGGGTTA TGGACTCCAA TGACCTGGAA CGGGAGAGAG GGATTACCAT TCTCTCCAAG AATACAGCGG TCAATTGGTT GGATACAAAA ATCAATATTG TGGATACACC GGGTCACGCC GATTTTGGCG GTGAAGTGGA ACGGGTCTTG AAGATGGTGA ACGGGGTGCT CCTGATTGTG GATTCCTTTG AAGGGCCCAT GCCCCAAACA CGCTTTGTGT TAAGAAAAGC TTTAGAGCTG AAGCTTGTTC CCATCGTTGT GATTAATAAG ATTGACCGTC CTGATGCCCG TCCTGCTGAA GTGGTGGACG AGGTCCTGGA TTTATTTATC GAATTAGGTG CCGATGAGGA GCAACTGGAT TTCCCCGTGG TCTACGCTTC GGCCCGGGAT GGGTTGGCCG GACTGGATCC CGACCAGCTT ACCGATAGCC TGGAGCCTCT TTTCAGTGTG GTGCTGGAGC ATATTCCCGC GCCCAGTGTG GATGTGGAAG CCCCTCTGCA GCTCCTGGTT ACCACCCTTG ATTATGACGA CTATGTAGGC AAGATTGTGA TCGGGCGCAT TGTCCGGGGC AAGGTCCGCC AAGGAGAGAA TATCGCCCTG ATCAAACGGG ATGGTGTTTT GGAGCGGGCC AAAATCGGCA AAGTCTATAC CTATGAAGGG TTGAAACGTA TCGATGTGCC CGAGGCAGAG GCCGGCGAAA TCGTGGCCCT CACCGGCTTG ACCACTGCCA ATATCGGGGA AACCGTAGCC GATGCCAATA ATCCGGAAGC TCTGCCGGTG ATTGAAGTGG ATGAACCCAC TTTGAATATG AATTTTATTG TTAACAACAG CCCTTTTGCC GGACTGGAAG GGGAATTTGT GACCTCCCGC AAATTAAGGG AGCGCTTATT CAAGGAGATC GAGACCAATG TGAGCCTTCG TGTGGAAGAA ACGGATTCGG CGGATTCCTT TAAAGTATCC GGCCGGGGAG AGCTCCATTT ATCCATTCTA ATTGAGAATA TGCGCCGGGA AGGCTATGAG CTTCAGGTTT CCAAGCCCGA GGTTATCTAT AAGATGATTG ACGGGGAGAA ATGTGAACCG ATTGAGTATC TTATCTGTGA TATTCCGGAA ACCGCTATGG GTACAGTCAT TGAATTGCTG GGGAAACGGA AAGCGGAAAT GATCAATATG GCCCATATTT CCCAGACCCA GATACGGGTA GAATTCAAAG TTCCCGCCCG GGGGCTGATC GGCTTTCGGG GGGATTTCCT GACCGAAACC CGGGGCGAAG GGATCATGAG CCATGTTTTC CACGGTTATG AGCCCTATAA AGGCGAAATA CCGGGCAGAA GCCGGGGGGT TTTGATCGCG TTTGAGACCG GCGAGGCGAC AACCTATGGG CTGCATTCCG CTCAAGAACG GGGCATCATC TTTATTGACC CCGGTACCAA GATTTATGAA GGCATGATTG TGGGGGAAAG CAACCGGGAA CAGGACATCG AAGTCAATGT GGCCAGAAAA AAACATGTCA CCAATATGCG TGCCAGCAAC TCTGAGGAAG CCCTTCGTTT GGAGAAAGCC AAAGTCTTTA CCTTGGAGCA GGCCCTGGAA TATATTGATG ATGATGAGTT GGTGGAGATC ACACCGAAGA GCGTTCGCTT GCGGAAAAAG CACCTCGACA AAAATGCCCG TGTCCGCTAT GCCAAATCCC TGGCTTCCAA CAGCGCAAAA TGA
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Protein sequence | MKSMNIRNIA IIAHVDHGKT TLVDAMLRQS GTFRANQNVM ERVMDSNDLE RERGITILSK NTAVNWLDTK INIVDTPGHA DFGGEVERVL KMVNGVLLIV DSFEGPMPQT RFVLRKALEL KLVPIVVINK IDRPDARPAE VVDEVLDLFI ELGADEEQLD FPVVYASARD GLAGLDPDQL TDSLEPLFSV VLEHIPAPSV DVEAPLQLLV TTLDYDDYVG KIVIGRIVRG KVRQGENIAL IKRDGVLERA KIGKVYTYEG LKRIDVPEAE AGEIVALTGL TTANIGETVA DANNPEALPV IEVDEPTLNM NFIVNNSPFA GLEGEFVTSR KLRERLFKEI ETNVSLRVEE TDSADSFKVS GRGELHLSIL IENMRREGYE LQVSKPEVIY KMIDGEKCEP IEYLICDIPE TAMGTVIELL GKRKAEMINM AHISQTQIRV EFKVPARGLI GFRGDFLTET RGEGIMSHVF HGYEPYKGEI PGRSRGVLIA FETGEATTYG LHSAQERGII FIDPGTKIYE GMIVGESNRE QDIEVNVARK KHVTNMRASN SEEALRLEKA KVFTLEQALE YIDDDELVEI TPKSVRLRKK HLDKNARVRY AKSLASNSAK
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