Gene Dhaf_2677 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2677 
Symbol 
ID7259684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2880214 
End bp2882640 
Gene Length2427 bp 
Protein Length808 aa 
Translation table11 
GC content53% 
IMG OID643562597 
ProductDNA gyrase, A subunit 
Protein accessionYP_002459139 
Protein GI219668704 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0557902 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTATTC CAGAAGAAAA TATAACCCAG CGCTCCTTGG AAGAGGTGCT GCCGGAGAGT 
TATTTAGGCT ATTCCAAACA TGTCATCCTG CAGCGGGCTG TTCCCGATGT CCGGGACGGC
CTCAAACCGG TGCACCGGCG GATTATTTAC GCCATGGATG AATTGGGCAT GACTCCTGAT
AAACCCTACA GCAAATCCGC CCGCCTGGTG GGGGACTGCA TGGGAAAATA TCACCCCCAT
GGGGATTCCT CCATCTATGA TGCTGCGGTG CGCATGGCCC AGCCTTGGGC TACCCGCTAT
CCTTTGATTG ACGGGCAGGG GAATTTTGGC TCCATCGACG GGGATGGGGC GGCGGCCATG
CGTTATACGG AGATGCGCAT GACCCATCTC TCCCAACTGA TGACCCAGGA TATCGAGAAA
GACGTCATTC CCTTCAAGCC TAATTATGAT CAGCGTGAAA AAGAGCCCAT TGTCCTGCCC
AGCCCCTTCC CGAATCTCCT AGTGAACGGC GGCTCGGGAA TCGCTGTGGG CATGGCCAGC
AATATCCCTC CCCATAACCT GCGGGAGGTG GTAGCCGCCC TGATCCTCCA GATCGATAAT
CCTCATGTCA CTTTAGAACA GTTGATGGAA AAGGTGAAAG GACCTGATTT TCCCACCGGA
GGACTGATTA TCGGTTCCCA GGGCTTTACC GAGGCTTACC GGAGCGGCCG GGGCAAAGTG
ACGATGCGGG GCAAAGCCAT CATCGAGTCC GGGAAAAACG GCAAAAGCCT GATCGTGATT
ACCGAGATTC CTTTTCAAGT TTCCAAATCC ACCCTGGCCG CCAAGATCGA AGCGCAATCG
GAAAACGGCA AGATCGAAGG GATCAGTGAA GTACGGGATG AATCGGATCG GGAAGGGATC
CGCCTGGTGG TGGAGTGCAA AAAGGATGCC GATCCCAAAC GGATCTTGAA GCTCCTCTAT
AAATATACCC AGCTCCAGGA AACCTTTGGC ATCATCAACC TGGTGATCAG CGAAGAAGGA
ACACCCCGGG TATTGGGATT AAAGGAGATT AACCACTCCT ATCTTCAGCA TCGCCGGGAA
GTCGTCCTGC GCAGAACAGA ATATGAACTG GCCAAAGCCA AAGCCCGGGC ACATATCCTG
GAAGGCTTGG TTATCGCTAT CAATAATCTG GATGAAGTCC TGCAGATCAT CCGTTCCAGT
AAAACCCCGG CCCTGGCCAA GGCCGGCTTG ATCACCCGGT TTGAGTTCTC TGAAGTTCAG
GCTCAGGCCA TCCTGGATAT GAAGCTTCAG CATCTGACCA ATCTTGAGCT GGATGGTATC
CGCAAGGAAT ATGCAGAGAT TCTGAAACTG ATCGCTGAAC TGGAGAGCAT TTTGGCTGAT
ATTAACAAAG TCTATACCAT CATCAAAAAT GAGCTTAAAC AGATCGCTGA TCAATACGGT
GATGAGCGCC GCACCCTGAT TCTTCCCGAG GATGTGGGAG ATGAAGTGGA TTACAGCGCC
TTTGAAGAAC CGGAAAAACC CATGGAAGTC TTGTTGACCA GGAAGGGCTT CATCAAGCAG
ATTCCGACCC CAACCCGGAG AAGCCAGATC AATGCCATTG CTTTTGCCTT TAAGGACGGA
GATGTACTCT TGGAACATGT ATCCTGCACA TCAAAGGATA CTCTCTATTT CTTCACCCAC
AGCGGCAAAT ACTATGATGC CAAGGCCAAA TTAGTTGCTG AAGCGGGAGC CAAGGAGAAG
GGCAGAGCCG TCAACAACCT GTTCCCCTTG CCTGAAGAGG AGCGCATCGT GGCCATGGTT
TCCTTGAGAG AAGAGAAAGA AGGGCAGTAT TTTGTCTTTG TCACCAAGGA CGGGCAGGTC
ATGAGAAGTC CGGTCAAGGA TTTCCTTAAT GCCAGAACTG CCGAGGCCAT GGGCTTAAAG
GAACAGGATG AAATCGTTAA GGTCTTCCTC AGCGCAGGCG AAGGAGAGCT GTTCCTAGCC
AGCCTGCAGG GACAGGCCAT CCGCTTTGCC GAGGCTGAAG TTAACCCCAT GGGCCGGAAA
TCCCGGGGGG TTAAAGGAAT GACCTTGAAC GAAGGGGATT ATGTGGTGGA TGCCCTCCTG
ATTCAACCCG GGGCAGACGG GGAGACCGGA GATCTGATCA CCGTTACTGA ACAGGGTTAT
GTTAAACGAA CTTCCCTTGA GGAATACAAG CCTCAGGGCC GGGCCGGCCG GGGCATCGCC
ATTGCCAAAA TCGATGCTGA AAAGACCGGG TATCTGGTCT CTCTGATCCA GGTTGGGCCT
AAGGAGGATA AGCTCCTGCA CATCATCCAG GCCGGCGGGG CAGTGACCGG CGTCGAAGCC
CAATCCCTGA AGAGGGAGTC CAGAGTCAAG AGCGGGGCAG GGTTGGTCAA TGTGATCATC
AATGATTATA TCGTGCATGT CCTATGA
 
Protein sequence
MSIPEENITQ RSLEEVLPES YLGYSKHVIL QRAVPDVRDG LKPVHRRIIY AMDELGMTPD 
KPYSKSARLV GDCMGKYHPH GDSSIYDAAV RMAQPWATRY PLIDGQGNFG SIDGDGAAAM
RYTEMRMTHL SQLMTQDIEK DVIPFKPNYD QREKEPIVLP SPFPNLLVNG GSGIAVGMAS
NIPPHNLREV VAALILQIDN PHVTLEQLME KVKGPDFPTG GLIIGSQGFT EAYRSGRGKV
TMRGKAIIES GKNGKSLIVI TEIPFQVSKS TLAAKIEAQS ENGKIEGISE VRDESDREGI
RLVVECKKDA DPKRILKLLY KYTQLQETFG IINLVISEEG TPRVLGLKEI NHSYLQHRRE
VVLRRTEYEL AKAKARAHIL EGLVIAINNL DEVLQIIRSS KTPALAKAGL ITRFEFSEVQ
AQAILDMKLQ HLTNLELDGI RKEYAEILKL IAELESILAD INKVYTIIKN ELKQIADQYG
DERRTLILPE DVGDEVDYSA FEEPEKPMEV LLTRKGFIKQ IPTPTRRSQI NAIAFAFKDG
DVLLEHVSCT SKDTLYFFTH SGKYYDAKAK LVAEAGAKEK GRAVNNLFPL PEEERIVAMV
SLREEKEGQY FVFVTKDGQV MRSPVKDFLN ARTAEAMGLK EQDEIVKVFL SAGEGELFLA
SLQGQAIRFA EAEVNPMGRK SRGVKGMTLN EGDYVVDALL IQPGADGETG DLITVTEQGY
VKRTSLEEYK PQGRAGRGIA IAKIDAEKTG YLVSLIQVGP KEDKLLHIIQ AGGAVTGVEA
QSLKRESRVK SGAGLVNVII NDYIVHVL