| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2674 |
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| Symbol | |
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| ID | 7259681 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | - |
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| Start bp | 2874994 |
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| End bp | 2877576 |
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| Gene Length | 2583 bp |
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| Protein Length | 860 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643562594 |
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| Product | N-acetylmuramoyl-L-alanine amidase |
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| Protein accession | YP_002459136 |
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| Protein GI | 219668701 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase
[COG2247] Putative cell wall-binding domain |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000467202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAAG TAATTTTTAC TCTAATTACT TCGCTTACCT TGGTGGTAAG TGCTTCTATA
AGTGTGTGGG CCAGCCCCCT GGCTTACCCC ATCGAGCGGT TGTCCGGCCA GGATCGGGTG
GGCACCGCCT TGAGTATCTC GGAAAAGGGC TGGACCTCCG CCGATACGGT GATTCTCTGC
GAGTATGCCG ACTTCCCGGA CTCTATCGCC TCCACTCCCT TTGCCGTAAG CCTCGATGCT
CCTATCCTGC TGACTCAAGG CACGGCTTTG GATCCAAGAG TGGTGGAGGA GATTAAACGC
CTCCAGCCCG GCCGGGTGGT TCTCCTGGGG GGGACCGGAG TGCTTAAACC CGCGATTGAA
GAGGAGCTGG GGAAATTTGA TTTCCCTATC GTTGTGGAAC GGATCGGTGG TCAAAACCGT
TACGAAACCT CTGTCCTCCT TGCCCAAAAG GTTCCCAATG ATGTCGTCAT TCTGGCCAAT
GGGGATACTT TCCCTGACGC CTTATCAGCG GCCAGCTTTG CCGGGATAAA ACAAATTCCC
ATCGTTCTCA CTTCGAAAAA GATGCCGGAA TTCGTTCTGA ACTATCTTAA TGAAACCCAG
CCCAGCCAGA TTATTGTCAT CGGCGGCGAG GGTGCCATCC CTTCGGAAGG CCTTACGGAT
CATGGTTTTG CCATAGAAAC CCGTCTCGGT GGTCAGGACC GTTATGAGAC CAACGCCGCC
GTCGTTTCTT TTGTGCAGGA TGCCTATGAA ACCGATGATC TTTTCTTAGC ATCAGGCATT
ACCTTCCCCG ATGCGGTAGC GGGAACCGTT CTGGCCGCCA AATATAAAGC TCCCCTTTTG
TTGACCGAAA AGGAAGATAT TCCGACCTCC GTCTATACAT ACATGCGGGA ACATATGAAA
GTGGAGCCTC CCCGTCCAAG TCCGGGACCT TCAGGAACTC CGGGAACTCC GACGACCCGG
CCCAAGCAGG CCGAAATCAC TCCCGCCGGC GGATTGAACC TGCGTGAAAG TCCCTCCTCC
TCCGGAGCAA AGCTGGCGAC TATCCCTCAA GGGACACTCA TCACCCTGCT TGAGGAACAA
GCAGGGTGGT ATAAGACCAC CTTTGCTGAC CAGACCGGTT GGGTTGCCGC CGAGTATTTA
ACCCTTGTCG ATCCATCCGG CTCAGATAAC CAGCCTGACA AGCCTGCTGA ACCGAAAACG
CGCCAGGGGG TTATTACGGC AGCCAATGGC TTGAACCTGA GGGATAATCC TTCCTCCAGC
GGAGAAAAAT TAGTGACGAT CCCTAAAGAT GCTACTATTC AGATTCTCGC TGAACAAAGC
GGCTGGTACC AAACCACTTA CGAGACCAAG ACGGGCTGGA TTTCCGCTGA ATATGTCTCT
TTAATCCCAT CTGAGGCATC TGATCCTCCT CCCGCCGCTC CGCCTGCCCC CAAAAAAGGC
AAAAGCACAG CTGCCAATGG CCTGAATCTT AGAGCCACCC CCGCCGCCGC CGGAGAAAAA
ATAACGACAG TTCCTGGGGG CACTCTTTTT GAAATAATTG AAGAGGAAAA CGGCTGGTAT
AAAATAAGCT TTGACTCCCA TACCGGCTGG GTATCCGGCG AATATGTGGA GATTGTGGAA
AATACTGATG AAGATAAAGC AGATGATGCC AAGGCTGATG AACCTGCTGT CAACCCTAAT
CCTCCCAGTG AAGAGACTCT TCCCGAGATA ACCATAGATT TGAGCGTCAA TGGTACAGTC
TATATCCTCG GGGGCTCCGG AGTGATTAGC TCAACGGCTC AGTCCATTAT TGAAGGGAAA
GCATTCTCTA AATACAAGGA AAATCTGCGG GATTTCCCGC CCCTGCCTGC GGAGATCAAG
AAAGAGGAAC CTCCGGAGGA AGAGGAGCCT GATGACCCGG AAGAGCCCGC TCCCCCTGTC
GACACCGAAT ATGATCCTTC TCGGGAAGTT CCGGTGGACC CTTTTATCGA TATTCCCGAG
TACGCCTTAG CCGGAAAAGT GATTATGCTC GACCCTGGCC ATGGTGGACC GGATCCCGGA
GCTTCGGGGC CGTCCAAAAC CCACGAGAAA GACAACACCT TACCCATCGC CCTTGCCTTA
AAAGATATCC TGACTCAAGC GGGTGCGGAA GTTCTGATGA CCCGTGAGGA TGACAGTTCA
CCCTGCACGG CCTCCAAATA TACAGAACTT GAGGATCTCA AGGCTCGTGT GGCTCTGGCC
AATTCCTGCA ATGCGGATCT TTTTATCAGT ATCCATAATG ATGCATTCAC TAACCCTGCA
GTCAATGGCA CGACGGTTTT CTACTCAGCG GCTAACCCAA AGAATGTGGA AAGCTTGCAT
CTGGCCGGCA GTATCCGCAC CTCGGTGATT GACATTATTA AAACCACAGA CCGGGGGGTT
AAACCAGGCA ATCTTTACGT TTTAAACAAT ACTAAGATTC CGGCGATTCT CCTGGAAATT
GCCTTTATAT CCAATCCCTA TGAAGAGGCC CGTCTGCAGA ATCAAACCTT CCGCGAAAAT
GCGGCGGCCG GCATCTTCAG AGGAATCTAT GCTTATTTCA CGACCCCTAT ACCCAAGGAT
TAA
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| Protein sequence | MKKVIFTLIT SLTLVVSASI SVWASPLAYP IERLSGQDRV GTALSISEKG WTSADTVILC
EYADFPDSIA STPFAVSLDA PILLTQGTAL DPRVVEEIKR LQPGRVVLLG GTGVLKPAIE
EELGKFDFPI VVERIGGQNR YETSVLLAQK VPNDVVILAN GDTFPDALSA ASFAGIKQIP
IVLTSKKMPE FVLNYLNETQ PSQIIVIGGE GAIPSEGLTD HGFAIETRLG GQDRYETNAA
VVSFVQDAYE TDDLFLASGI TFPDAVAGTV LAAKYKAPLL LTEKEDIPTS VYTYMREHMK
VEPPRPSPGP SGTPGTPTTR PKQAEITPAG GLNLRESPSS SGAKLATIPQ GTLITLLEEQ
AGWYKTTFAD QTGWVAAEYL TLVDPSGSDN QPDKPAEPKT RQGVITAANG LNLRDNPSSS
GEKLVTIPKD ATIQILAEQS GWYQTTYETK TGWISAEYVS LIPSEASDPP PAAPPAPKKG
KSTAANGLNL RATPAAAGEK ITTVPGGTLF EIIEEENGWY KISFDSHTGW VSGEYVEIVE
NTDEDKADDA KADEPAVNPN PPSEETLPEI TIDLSVNGTV YILGGSGVIS STAQSIIEGK
AFSKYKENLR DFPPLPAEIK KEEPPEEEEP DDPEEPAPPV DTEYDPSREV PVDPFIDIPE
YALAGKVIML DPGHGGPDPG ASGPSKTHEK DNTLPIALAL KDILTQAGAE VLMTREDDSS
PCTASKYTEL EDLKARVALA NSCNADLFIS IHNDAFTNPA VNGTTVFYSA ANPKNVESLH
LAGSIRTSVI DIIKTTDRGV KPGNLYVLNN TKIPAILLEI AFISNPYEEA RLQNQTFREN
AAAGIFRGIY AYFTTPIPKD
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