Gene Dhaf_2656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2656 
Symbol 
ID7259663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp2860395 
End bp2861033 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content47% 
IMG OID643562576 
Producttranscriptional regulator, TetR family 
Protein accessionYP_002459118 
Protein GI219668683 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.000000000478919 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTTATA ATAAAACGGA CCGAGTCCTT GAGAAACAAG AATTGCGCCG GAAAAGGATA 
ATCAAAGCCG CCAAGGAAAT CCTATCGGAA GAAGAGGAGA TCGGCAAGGT TTCCATTAAG 
TCCATCGCCA GGCGGGCCGG CATCGCCACA GGGACCTTTT ATCTCTATTT TACGGATAAA 
GAATCTCTGG TGGATATGAT TGTCAAAGAG ATCTACGCCG AATTGCTGGC CAAAATCAAG 
CAGGAACGGG CACAGTACAC CGATACCTTT GCTAAGCTGC AGGCCTCCAT GGAAGTGTGC 
ATCCGCTTGT TCCTGAAAGA GAAGTACCTG GCCAAAATCC TCCTGGAACA ATTTCCCCAG 
ATCCACACGG CTTTGAATAC TAAATATGCC GATATTGAAG AGGATTTGAT CCGCTTGACC 
AAAATTGATC TGGATGAGCT TATGGCGGAA AGACTGATCC CCAGGCAGGA TACCAATGTC 
ACCGCTACGG CCTTTGTGGG AACCTTCCGC GAAGTGATTC TGGCGTGGAT CGGCAAGGGT 
GAACCCCAGG ATATTGAGCT GGCCTATCAA ACCCTCATTG ATTACAACAT GCGCGGGATT 
GGGAGATATA AAATTGATGA AGAACTATTT AACCATTGA
 
Protein sequence
MVYNKTDRVL EKQELRRKRI IKAAKEILSE EEEIGKVSIK SIARRAGIAT GTFYLYFTDK 
ESLVDMIVKE IYAELLAKIK QERAQYTDTF AKLQASMEVC IRLFLKEKYL AKILLEQFPQ 
IHTALNTKYA DIEEDLIRLT KIDLDELMAE RLIPRQDTNV TATAFVGTFR EVILAWIGKG 
EPQDIELAYQ TLIDYNMRGI GRYKIDEELF NH