| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2646 |
|---|
| Symbol | |
|---|
| ID | 7259653 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 2848591 |
|---|
| End bp | 2849553 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643562566 |
|---|
| Product | methionine-R-sulfoxide reductase |
|---|
| Protein accession | YP_002459108 |
|---|
| Protein GI | 219668673 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0225] Peptide methionine sulfoxide reductase
[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.00677049 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTTG ATAAAACCAA TCTGGAAATT GCTACGTTTG CCGGGGGGTG CTTTTGGTGT
ATGGAATCAG TATACAGCCC CTTGCCTGGG GTTTTGGAGG TTCTATCCGG CTACACCGGC
GGCCATGTGG AAAACCCCAC CTATAACGAG GTCTGTTCCC ACACCACCGG ACATAGGGAA
GCGATCCAAA TTAAATTCAA TCCGAATATT GTGAGCTACA AGGAACTCTT GGCTTTTTTC
TGGCGGCAAA TCGATCCCAC CGATCCCGGC GGACAGTTTC ACGATCGTGG TGAGTCCTAT
CAGACAGCTA TTTTTTATCA CAGCGAAGAA CAGCGCCGGC TGGCCGAAGA GTCTAAACAG
GCTTTAATCA GCAGTTCGCA TTTTGATAAG CCCATCGTTA CTGAGATTCT CCCGGCTGCT
CCCTTCTATC CGGCAGAAGA TTACCACCAA GGCTATCATC AAAAAAATGC TTTCCGCTAT
GCACTTTACC GCCAGGGTTC AGGCCGGGAT GCCTTCATCA ACAAACATTG GGCAAAAGAA
AAGGAGCAAT TAAAAAAGCG TTTAACTCCG CTGCAATTTC ATGTGACTCA GGAAAAAGGC
ACGGAACCTC CCTTTCAAAA TGAGTTTTGG AATAACAAGC AGGAAGGGAT TTACGTGGAT
GTCGTTTCCG GTGAGCCTCT ATTCAGTTCG AAGGATAAAT TCGACAGCGG CTGCGGCTGG
CCTAGTTTTA CCAGGCCGGT GTTAAAAAGC AATATCGTCG AAAAAATTGA CCTCAGCCAT
AATATGACCC GCACAGAGGT CGTCAGCCGC AATTCTGAAT CTCATTTGGG ACATGTTTTC
GATGACGGAC CGGGGCCGGA TGGCTTGCGT TACTGCATCA ATTCGGCTGC TCTGCGCTTT
ATCCCGAAGG AAGATCTGGA ACGGGAGGGC TATGGGGATC TGCTCCGTTT GTTCCGGGAT
TAG
|
|---|
| Protein sequence | MTVDKTNLEI ATFAGGCFWC MESVYSPLPG VLEVLSGYTG GHVENPTYNE VCSHTTGHRE
AIQIKFNPNI VSYKELLAFF WRQIDPTDPG GQFHDRGESY QTAIFYHSEE QRRLAEESKQ
ALISSSHFDK PIVTEILPAA PFYPAEDYHQ GYHQKNAFRY ALYRQGSGRD AFINKHWAKE
KEQLKKRLTP LQFHVTQEKG TEPPFQNEFW NNKQEGIYVD VVSGEPLFSS KDKFDSGCGW
PSFTRPVLKS NIVEKIDLSH NMTRTEVVSR NSESHLGHVF DDGPGPDGLR YCINSAALRF
IPKEDLEREG YGDLLRLFRD
|
|---|
| |