Gene Dhaf_2640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2640 
Symbol 
ID7259647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2844029 
End bp2845159 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content40% 
IMG OID643562560 
ProductUroporphyrinogen-III decarboxylase-like protein 
Protein accessionYP_002459102 
Protein GI219668667 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0407] Uroporphyrinogen-III decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCATC GTGAAAGGGT ATTAGCGGTT TTGAACAAAA AACTGCCTGA CCGTATCCCT 
ATGGATTTAT GTGAATCGGC GAGCTTTATT AATGATCCGG CCTATTTTGC TTTGAAAAAC
TATTTTAATA TTGAGGGAGA GGTTGAGCCG TTCCGCAGAA ATTTTACGGC GAACTATTAT
GACCCACGTG TTCTGCAAGC TTTGGACATT GATTTTCGCC ATGTTTGGCT GAAAACGCCT
ACGGGTTATC AAAATACAAT GTATGATGAT GGCACTTTTT CTGATGAATG GGGTGTCGTC
TATAGGTTAT TGGGAAATGA AAGAGCTATT GTAAAGTATC CTTTATTGAA TGCAGATGAA
AGTGATCTTG ATAACTATCC ATGGCTTGAT CCATATGCTC CGGGACGTGC TGAGGGCTTG
GCAAAACGTG CCCATGACCT GCTCCAAAAT ACCGATTACG CTATTGCCGC CCATGCTGCT
CATAATTATG GATTCTTCGA TACTGCTTGG ATTATGAGAG GATTTGATAA TTTTTTAGTT
GACCTCATGA TCAATAAACC ATTTGCCAAG CGTTTATTAG GAAAAATTCT TGATATATTT
TTAGGACTTC ATGAAGTATA CCTAAATGCA GTGGGACCCT ATATCCATAT GATAGCTTTC
TGTGAAGATT ATGGCATGCA GAACGCACCA TTTATCTCAC CTGAATTATA TAAGGAGATG
CTGCAACCGT ATCATAAAGA ACTCTTTGCC TTTATTAAAA AGAAGGCCCC TCAGGCTAAA
ATAATGTTTC ACAGTTGTGG GGCTGTTTAC CCATTGATTC CTTTGTTAAT TGAAGCCGGA
ATTGACGTTT TGAATCCTAT CCAGCATACG GCAAACGGCA TGGACCCGCT TAAAATAAAG
CAGGAATTTG GTTCTGAAGT TATTTTTCAT GGTGGCATAG ATGTTCAGCA TGCTCTAGCC
GGAAGTATAG AGGGCGCTGA AAAAGAAGTT AAAAATATGA TTGACACATT AGGAGAAAAC
GGTGGTTATA TCGTAGCGCC AGCCAATGTT GTTTCGGGGG AAACTCCTCC TGAAAACATC
GCAAGTCTAT ACAGAACAGC GGCAAATTAT GGCAGATATG ATCTGAAATA A
 
Protein sequence
MNHRERVLAV LNKKLPDRIP MDLCESASFI NDPAYFALKN YFNIEGEVEP FRRNFTANYY 
DPRVLQALDI DFRHVWLKTP TGYQNTMYDD GTFSDEWGVV YRLLGNERAI VKYPLLNADE
SDLDNYPWLD PYAPGRAEGL AKRAHDLLQN TDYAIAAHAA HNYGFFDTAW IMRGFDNFLV
DLMINKPFAK RLLGKILDIF LGLHEVYLNA VGPYIHMIAF CEDYGMQNAP FISPELYKEM
LQPYHKELFA FIKKKAPQAK IMFHSCGAVY PLIPLLIEAG IDVLNPIQHT ANGMDPLKIK
QEFGSEVIFH GGIDVQHALA GSIEGAEKEV KNMIDTLGEN GGYIVAPANV VSGETPPENI
ASLYRTAANY GRYDLK