Gene Dhaf_2564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2564 
Symbol 
ID7259535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2768099 
End bp2768671 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content47% 
IMG OID643562449 
Productdimethylsulfoxide reductase, chain B 
Protein accessionYP_002459027 
Protein GI219668592 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID[TIGR02951] DMSO reductase, iron-sulfur subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00132366 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAATC AATACGGTTT TTATGTAGAT CAGCACAATT GCATTGGCTG TTTTACCTGT 
CAGATTGCCT GTAAGGATAA AAATGATTTG GCAGACGGCT TGCGCTGGAG AAAGGTTCAT
GAATTTACCG GCGGCTCCTG CATCGAAGAA AACGGCGTAT TCAAAAGCAA TGTCTTTGCT
TACTGGCTCT CTCTGGGCTG CAATCATTGT GAACATCCTA AATGTGCGGA GAATTGTCCC
ACCGGCGCCA TGTACAAACG GGAGGAAGAT GGTATCGTCT TGGTGGATCA GGATAAGTGC
ATAGGCTGCG GTTACTGTAC CTGGTCCTGC CCTTATGAAG TGCCCCAGGT TGCCGGAAAG
ACAGCATCCA AATGCAACTT CTGCATTGAT CTGCAAAAGG AAGGAAAAAA TCCGGCCTGT
GTCGATGCTT GCATTATGCG GGTATTGAAA TTCGGCCCCC TTGATGAACT GCGAGCTGAA
TATGGAGAAA TTGCTCAGGT CAAAGGGTTG CCCAGTGCCG ATATCACCAA ACCTTCCTTG
GTTATTACGC CCCATAAGGC TGCAATAAAG TAG
 
Protein sequence
MANQYGFYVD QHNCIGCFTC QIACKDKNDL ADGLRWRKVH EFTGGSCIEE NGVFKSNVFA 
YWLSLGCNHC EHPKCAENCP TGAMYKREED GIVLVDQDKC IGCGYCTWSC PYEVPQVAGK
TASKCNFCID LQKEGKNPAC VDACIMRVLK FGPLDELRAE YGEIAQVKGL PSADITKPSL
VITPHKAAIK