| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2563 |
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| Symbol | |
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| ID | 7259534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 2765702 |
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| End bp | 2768086 |
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| Gene Length | 2385 bp |
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| Protein Length | 794 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643562448 |
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| Product | anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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| Protein accession | YP_002459026 |
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| Protein GI | 219668591 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR00509] molybdopterin guanine dinucleotide-containing S/N-oxide reductases
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR02166] anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000909986 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAATA AAGATTTCAA GGTCAGTCGC CGCTCCTTTT TGAAATGGAG CGCAGCTGTT
GCCGGCTCAT CGACACTGGT GGGATGCATG CCCCTAACTT CGGGAGCAGG AGCTGAACCG
GCAGTTGCTC AAGCCGGAAA CCGTCATCTT GATGCGGAAA TAAAGCCTTC GATATGTTGG
CATAATTGCG GCGGGCGCTG TCAGATTAAA GCCCAGGTGA AGGACGGTGT TGTCCTGAGT
TTTGTGACGG ACAATGAGGG ACCGGATACT CCGGATAATC TTCAGGCCAG GGCTTGTTTG
AAAGGGAGAT CCCAGCGTCA GCGCCTCTAT CATCCGGATC GGCTGAAATA CCCCATGAAA
CGAGTGGGGG AGCGGGGAGC CGGGCAATGG GAGAAGATCT CCTGGGAAGA GGCTCTGGAT
ACCACAGCTT CTGAGTTAAA ACGTATTATC AATCAATATG GCAATGAATC GGTATATTTT
ATTTATGCTT CAGGGGTAGG TGGGGCATTT AACCAAAGCT ATGTAGGGGG AGCATCTGCG
AGACTTCTTA ATGCACTGGG AGGATATCTG AGCTTTTATG GCAACTACAG CCAGGCCAAT
TATATGTATG CCATTCCTTA TATGTTTGGA GCCGGTTATG GAGGAAGCTC ACCCACCAGT
TTTTCAGATG CCCAGCTGAT CGTGATGTTC GGCGATAATC CCGCCAGCAC AAGAGTGGGT
GGTCTTAATT CAACATACTA TCTCAAATTA GCGAAAGAAA ACGGAACCAA AGTTATTGTC
ATCGATCCCC GTCACAGTGA TACGGTAGGC ACCTTTGCCG ACCAGTGGAT TCCTATTCGT
CCGACCACTG ATGCGGCACT TGTGGCAGGC CTTGCTTATG TCATACTGAC AGAGGAGCTT
CATGATCAAG CCTTTCTGGA CAAGTATTGT ATAGGTTTTG ATGAAGAGCA CATGCCTGAG
GGAGTTCCGG CAGGAAATTC CTATAAGAGC TACTTGCTGG GAGTCAGCGA TGGACAGCCG
AAAACTCCGC AATGGGCATC GGAAATCACA GGTGTTCCTG TAGAAACGAT TATACAATTG
GCCAGAGAGA TTGCCGGTGC CAAGCCCTGC TTTATTCTGC AGGGACGGGG CATGCAGCGC
CATGCCAACG GAGAATTCCA GGCTCTTTCT GTTCCTCTTT TAGCCCTGAT GACAGGGAAT
ATGGGCAAAC TCGGCGCTAA TCCCGGTATG TATGAAGGCT TTACTTCCGT AAAAATGGGG
GCATACCCTG CAGGAACAAA TCCAATACAA ACCAAAGTAT CCTTCTTTAT GTTTACCGAT
GCCATTGAAA AAGGAGGCAA CCACACCAAA GAAAATGGTG GCCTGCAAGG TGCGGACCGG
TTGCAGCATG GCATCAAGTT TATCTGGAAT TATGGCGGCA ATGCCTTGAT CAATCAGCAT
TCCGATACCG GACGGACCAC CGAGTTATTG AAAGATACAT CGAAATGCGA ATTTATCCTG
GGCATTGAGA ATTTTATGAC CCCCAGTATG GAGTATGCCG ATATCATCCT CCCCGATATC
ACACAATTTG AGCAGGAGGA TATCGTCACC CGGGCTTTGG GACAAGGGCT TGCCCTGTAT
GGGCAAAAAT TGGTGGACCC TTTGTATGAG TGCAAGGGTG TTTATGAAAT CTGCACAGAA
CTGGCCAAAC GCCTGGGCGT CCTTGATAAA TTTGATGAAG GAAAAAGCCA GGAGCAATAT
TTGCGCGAAT GTGTCGCTGT GGCTCAGGCG GCTCATCCCG ACTTCCCGTC TTTCGAAGCA
TTCCGGGAAA AGGGCATTTA TAAGACGAAA CCTAAGAAAG TTATTGCTTA TCAAGCCTTT
GTGGAGGATC CGGAAAAGAA CCCGCTGCAA ACTCCCTCCG GAAAGGTGGA GATTTTCTCC
AAAACTCTCT ACGATATGAA TAATCCGGAG AGAATACCGG CTGTTCCTAA ATATGTAGCT
GTTGCAGAAG GTCCGAAAGG CGCTCTGAAA GAAAAATATC CCCTGCAATG CATCGGCCAT
CACAGCAAAC GCCGTGTCCA TTCCACCTTT GATAATCTGC CCTGGATGGA GGAAGCGGAG
CCTCAGAAGC TATGGCTCAA CCCTCAGGAC GCCGCGGCGA GAGGAATTGA AGATGACGAT
ACGGTCAAGA TCTTTAACGA TCGAGGGACG GTAAAAGTCA AAGTGAAGGT TACTCCCCGT
CTCATCCCAG GGGTATGCTC TCTTCCTCAA GGAGCTTGGT ATACCCCTGA TGCTCAGGGC
GTGGATACCA GAGGATGTAT CAACACCTTG ACCACTTGGG AGCCCACCGC TCTGGCCTGG
GGCAATCCTC AGCATACGAA TTTAGTCCAA GTAGAGAAAG CGTAG
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| Protein sequence | MVNKDFKVSR RSFLKWSAAV AGSSTLVGCM PLTSGAGAEP AVAQAGNRHL DAEIKPSICW
HNCGGRCQIK AQVKDGVVLS FVTDNEGPDT PDNLQARACL KGRSQRQRLY HPDRLKYPMK
RVGERGAGQW EKISWEEALD TTASELKRII NQYGNESVYF IYASGVGGAF NQSYVGGASA
RLLNALGGYL SFYGNYSQAN YMYAIPYMFG AGYGGSSPTS FSDAQLIVMF GDNPASTRVG
GLNSTYYLKL AKENGTKVIV IDPRHSDTVG TFADQWIPIR PTTDAALVAG LAYVILTEEL
HDQAFLDKYC IGFDEEHMPE GVPAGNSYKS YLLGVSDGQP KTPQWASEIT GVPVETIIQL
AREIAGAKPC FILQGRGMQR HANGEFQALS VPLLALMTGN MGKLGANPGM YEGFTSVKMG
AYPAGTNPIQ TKVSFFMFTD AIEKGGNHTK ENGGLQGADR LQHGIKFIWN YGGNALINQH
SDTGRTTELL KDTSKCEFIL GIENFMTPSM EYADIILPDI TQFEQEDIVT RALGQGLALY
GQKLVDPLYE CKGVYEICTE LAKRLGVLDK FDEGKSQEQY LRECVAVAQA AHPDFPSFEA
FREKGIYKTK PKKVIAYQAF VEDPEKNPLQ TPSGKVEIFS KTLYDMNNPE RIPAVPKYVA
VAEGPKGALK EKYPLQCIGH HSKRRVHSTF DNLPWMEEAE PQKLWLNPQD AAARGIEDDD
TVKIFNDRGT VKVKVKVTPR LIPGVCSLPQ GAWYTPDAQG VDTRGCINTL TTWEPTALAW
GNPQHTNLVQ VEKA
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