Gene Dhaf_2557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2557 
Symbol 
ID7259528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2760196 
End bp2760975 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content51% 
IMG OID643562442 
ProductABC transporter related 
Protein accessionYP_002459020 
Protein GI219668585 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0000637535 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAG TTTTGATAAA AACCCACCAA CTCACCAAAC GCTATGGCGA TGTTCCTGTG 
GTGAACCAGC TAAATCTGGA GGTAAGGGCA GGGGAGATTT TTGGCTTCCT GGGACCCAAT
GGGGCGGGGA AAACCACTAC CATCAAAATC CTGACCGGAC TTATGGAGCC CAGTGAAGGG
GAAGCTTTGA TCTGCGGTTA TGATATTCGC AAGCAGCCCA CTCAAGCCAA AGCCTTGATG
GCCTACGTCC CCGATCAACC CAAATTATAC GGCAAGCTCT CGGCCTGGGA ATTTCTGAAG
CTCATCGGCG ATCTTTATCA GATACCTAAA GATGTGTCCC GCAAAAGAGC AGAGATGCTT
ATGGAGATGT TTGGCCTGCT GGACAGAGCT GATGAACTTT TGGAGGGATA TTCCCACGGG
ATGCGCCAGA AGGTAGTGCT GGCCTCAGCT CTGATCCACC AACCGAAAGT CATTCTCCTG
GACGAACCCA CCGTAGGCTT GGATCCGGCC AGCGCCCGTC TCCTCAAGGA TGTTTTGCAG
GAATTGGCAC ACCAGGGAGC GGCGGTTTTT GTCTCTACGC ATATCTTGGA GATTGCGGAA
AGAATGTGCC ACAGGGTGGG CATTCTGGAA AAAGGAAAAC TCATCGCTCA AGGCAGCCCG
GAGGAATTGC GCCAAAACGT AGGACATGGG GGAGAAAGTT TAGAAGATAT TTTCCTGGAG
CTGACCGGAG GTCATGAAAA TGAGGAATTG ATCAAAAGCC TGGAGGAGGG ACGAGCGTGA
 
Protein sequence
MNQVLIKTHQ LTKRYGDVPV VNQLNLEVRA GEIFGFLGPN GAGKTTTIKI LTGLMEPSEG 
EALICGYDIR KQPTQAKALM AYVPDQPKLY GKLSAWEFLK LIGDLYQIPK DVSRKRAEML
MEMFGLLDRA DELLEGYSHG MRQKVVLASA LIHQPKVILL DEPTVGLDPA SARLLKDVLQ
ELAHQGAAVF VSTHILEIAE RMCHRVGILE KGKLIAQGSP EELRQNVGHG GESLEDIFLE
LTGGHENEEL IKSLEEGRA