| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2550 |
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| Symbol | |
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| ID | 7259521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 2754341 |
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| End bp | 2755912 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 643562435 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_002459013 |
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| Protein GI | 219668578 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00133049 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAAA TAGTATTATT GCTGTTGCTC GCCGGACTAA TGCTGATGGT GGGCTGTTCT
GCTTCTAACG GCGGAAAAAA TATCACAGAA AATGTCGCGA AAGATGAAAT TACTATTTCG
GCCGGGGTCA ATTTGGTGGC CGGTGGTTTT GACCCGACCA CAGGCTATGG CGTATGGGCA
CCGGATATAT TTCACAGTCA CTTATTGCAA GTAAAAGAAA ACAACCAATT GGTCAATGAT
TTAGCCACCT CTTATGATAT CAGTGCAGAT GGATTAACGT ACACCTTTAA AATCCGCAAT
GATGCAAAAT TTGCGGATGG CCATTCCTTA ACTTCGGAAG ATGTGGCCTT TACTTTTGAA
ACAACCAAAA GCAAAGCTTC CGCCGCGGAT CTGACCATGC TGGATTCAGT TGAAGCTTTA
GACGAAAGTA CTGTTGTTTT CCGCTTAAAA GCCCCCTGGT CTACGTTTGT CTTTAATCTA
AGCGAGGTGG GAATTGTCCC CAAGCATCTC TATAATGAAA ACTATGGGGA TCATCCGATG
GGCTCCGGTG CCTGGAAAGT TGCCGAATTT GCAGTTGATC AGAAGTTGAT CCTGGTACCG
AATGAACATT ATTACGGCCC AATACCGAAG TTTAAGAAAG TAACCATCTT AAAATTGGAT
GAAGATGCGG CTCTGGCGGC AGCGAAATCA GGGCAGTTGG ACTTGGTGCT TGTCGAATCT
GAATTTGCCA GCACGCCGGT TGACGGAATG AAACTATATA GAATGTCCGC CATGGATGCT
TTTACCATTA ACCTGCCAAC GATTCCGGAA ACGACCGACC CTTCAGGGCA AAAAGTAGGC
AATAATGTCA CAAGTGATCC GGCGATTCGC AAAGCCTTGA ACATTGGGAT AAACCGGCAG
CTCATTACCC AAAACGCTTT GAACGGATTT GGGCAAGTTA CTTATGGAGC GGCGAAGGAA
CTTCCCTGGA GTAATGGCGA CATGTTTAAA GACAACCAGG TTGAAGAAGC GAAAAAGATC
TTGGAAGATG CAGGATGGAA AGATACTGAC GGGGACGGCA TCCGGGAGAA AAATAATATT
AAGGCGGAAA TCGTGATAAC AGGACGAAGC AATGATCTGG CGCGTTATAA TACGGTCGTT
GCTCTGGCAG AAGATGTGAA AAAGCTGGGA ATACAGATTA TCCCCAAATC CGCACCTTGG
TCGGAATGCC GGGAAGCGAG GAATTTACCG ACTTGCTGGG TCTTTGGTCA GCCTAATCCC
ATAGAATTCT ATCGTTATTA TGATTCTTCG CAAATTGGTG TAGCGGTTAT CGGCAACCCG
GCTTCTTATA CCAATCCGGA GGTTGATGCG GTTATCCAAA AAGCCCTTGC AGCAACGAAC
TCTGACGAGG CAAATAAATA CTGGCAGGAA GGCCAGGCTC TTGCGCAAAA GGATATTCCG
TACTTGTGGA TCGTTCGTCC GGAAGTCACT TATCTTGTCA AAGAAGGGCT GAAGATCCCC
TCTTTGCAGA AATTGCCAAC CCGGGGGCAG GGGATTTCCA TTGTAGAAAA TATGAATGAG
TGGTCCTGGT AG
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| Protein sequence | MRKIVLLLLL AGLMLMVGCS ASNGGKNITE NVAKDEITIS AGVNLVAGGF DPTTGYGVWA
PDIFHSHLLQ VKENNQLVND LATSYDISAD GLTYTFKIRN DAKFADGHSL TSEDVAFTFE
TTKSKASAAD LTMLDSVEAL DESTVVFRLK APWSTFVFNL SEVGIVPKHL YNENYGDHPM
GSGAWKVAEF AVDQKLILVP NEHYYGPIPK FKKVTILKLD EDAALAAAKS GQLDLVLVES
EFASTPVDGM KLYRMSAMDA FTINLPTIPE TTDPSGQKVG NNVTSDPAIR KALNIGINRQ
LITQNALNGF GQVTYGAAKE LPWSNGDMFK DNQVEEAKKI LEDAGWKDTD GDGIREKNNI
KAEIVITGRS NDLARYNTVV ALAEDVKKLG IQIIPKSAPW SECREARNLP TCWVFGQPNP
IEFYRYYDSS QIGVAVIGNP ASYTNPEVDA VIQKALAATN SDEANKYWQE GQALAQKDIP
YLWIVRPEVT YLVKEGLKIP SLQKLPTRGQ GISIVENMNE WSW
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