Gene Dhaf_2538 details

Gene Information

• Locus tag: Dhaf_2538
• ID: 7259509
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 2742599
• End bp: 2744389
• Gene Length: 1791 bp
• Protein Length: 596 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 643562423
• Product: fumarate reductase/succinate dehydrogenase flavoprotein domain protein
• Protein accession: YP_002459001
• Protein GI: 219668566
• COG category: [C] Energy production and conversion
• COG ID: [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
• TIGRFAM ID: [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTTGAGA AAAAAACGGC TACTGAAGAA AAAAGTTTAT CCCGGAGAGA TTTTTTGCGC 
AACACCGGTA TTTTGGCCGG AGGAGCTGTT CTCGGCACCG GTCTGTTAGC CGGTTGTTCA 
GACAGTGCCG CCAAGGCGGA GGCTCCGCCT CCGGTTGAGC AAACCTGGGA TTATGAAGCC 
GATGTCGTCA TCATTGGTCT GGGGGGCGCA GGTGCATCGG CAGCCATTGA AGCTCACGAT 
GCCGGCGCCA AAGTTCTCGT TATCGAAAAG CAGGCAGAAA AGACTCATTA CCCCAATACG 
AGAATGAGCG GCGGCGTATG GCATAACCCT GATCCAATGG GCGATAGGGG AGCCCGGGTT 
GAGTATATCA AAGCTATGAT GAGCGGGGAA AATATTCCTT GGAAGAACGA AGGCGAGCAG 
GAACATGTAT CCGCTGAAAT GGCGGAAATG TTTGCCGACG GTATTATGGA TGTAGAAAAC 
TTCCTGATGA CCCAGGCTCC TGACCTCGAT CCCGCCGGCA TGGCACCCGG AGGGGAGGCA 
TCCTTCCCGA TGTTCCCGAA GTTTAAGGAA GCCAAATACG GCAAAACCAT TAATACCCGC 
TATAAGGATT TTCAGAATGC TGATGACAAT GTCCCGGCCT ATGAGCAGCC CAAAGAGCAG 
AAATCCGCAG GGGAAGCATT CTATTGGGCC CTTGTTGAAG AGGGAATCAA AGGAAAACGT 
CCGGAAATTC AGATTTTATT CAGTACCCCG GCCAAAAGGT TAATTCAAGG GGAGAACGGT 
GAAATCCGTG GGGTTATCGC TACCCAAGGC GATAAGGAAA TCAAAGTTAA GGCGAAAAGG 
GCAGTCGTGC TGTCCAGTGG CGGATATGAA TATAATCTCC CCATGCGCAG AGCTTTCCTG 
GAAGGTCCCG GAGTAACAGG GTGGGGATTT TACGGATCAC CGGATAATAC GGGTGACGGC 
ATTGAAATGG CTATCCTGGT GGGCGCCGGT TTGGTCAAAG TGGCTAAAGC AGCCTCTCGG 
ATTGAGTCAG CCTTCCCCCA CGGGAAGAAT TGGGATGAAA AAGGCCTCAA AATGGGTTCC 
AACACCAGCG TAACCTCTTC GAAGAACAGT GTCATCGTCG ATAACTTCGG CAAGCGCTAT 
ACTGATGAAC ACATCATCAC CGATTCCACA CGCCCCTATC GTTATCAATT CTATAAAGAA 
GCTGTCCATT ATGATCTCTT AACCATGAAC TACCCCCGGA TTCCCAGCTG GATCATCTTT 
GATGAAACCC GCAGAACCTC CAGTCCGGTG GTAGGAACCA GCGGCTCAAC CGTGGGTTAT 
GGCTTCCTGC CTTGGAGTAA GGATAATTTA GATGCCATCC AACGGGGCTG GATCCTTAAA 
GCCGATACCC TTGAAGAATT AGCGGCCAAG ATCAAAGCCG ATCCGGAAAA CCGTGAGCTT 
ATTGATACGC AAACTCTGAT CGACAATGTG AAGAAATTTA ATGAATACTG TGCTGTCGGT 
GTAGATAAAG ACTTTGGCAG AACTCCTGCC ACCATGGGTC CCGTTGAGAA ACCGCCTTTC 
TATGCTATGA AGCTGTATCC GGGAGGACCA AACACTAAGG GTGGTATTGA TGCCAATGCC 
AAGCGGGAGG CCCTTGATTG GAATGCCAAG CCCATACCAA GACTTTACAC AGCCGGTGAA 
ATATCTTCAG TCTTTAAGTT TACTTATCAA GCCGGCGGCA ATTTGACCGA ATGTATCGTC 
TGCGGACGGG TGGCAGGTAA GAATGCCGCC GGACAGACCC CGTGGTCATA A 

 

Protein sequence

MVEKKTATEE KSLSRRDFLR NTGILAGGAV LGTGLLAGCS DSAAKAEAPP PVEQTWDYEA 
DVVIIGLGGA GASAAIEAHD AGAKVLVIEK QAEKTHYPNT RMSGGVWHNP DPMGDRGARV 
EYIKAMMSGE NIPWKNEGEQ EHVSAEMAEM FADGIMDVEN FLMTQAPDLD PAGMAPGGEA 
SFPMFPKFKE AKYGKTINTR YKDFQNADDN VPAYEQPKEQ KSAGEAFYWA LVEEGIKGKR 
PEIQILFSTP AKRLIQGENG EIRGVIATQG DKEIKVKAKR AVVLSSGGYE YNLPMRRAFL 
EGPGVTGWGF YGSPDNTGDG IEMAILVGAG LVKVAKAASR IESAFPHGKN WDEKGLKMGS 
NTSVTSSKNS VIVDNFGKRY TDEHIITDST RPYRYQFYKE AVHYDLLTMN YPRIPSWIIF 
DETRRTSSPV VGTSGSTVGY GFLPWSKDNL DAIQRGWILK ADTLEELAAK IKADPENREL 
IDTQTLIDNV KKFNEYCAVG VDKDFGRTPA TMGPVEKPPF YAMKLYPGGP NTKGGIDANA 
KREALDWNAK PIPRLYTAGE ISSVFKFTYQ AGGNLTECIV CGRVAGKNAA GQTPWS