Gene Dhaf_2525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2525 
Symbol 
ID7259496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2728570 
End bp2729115 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content40% 
IMG OID643562410 
Producthypothetical protein 
Protein accessionYP_002458988 
Protein GI219668553 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.0123502 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGAGAG GCATAATTGT TTTTGGATCA AACGGCAGCG GAAAATCCAC TCTGGGACGA 
GAGCTGGCGC GTATTTTGAA TTTTAAGTAT ATGGATATTG AAGATTATCA CTTTATAAAA
TCAGAAATTC CATACACAGT AGAGCGCACA CGTGAGGACC GTTTAAATTT AATGCTTGCC
GATATCGAGA AAAGTGGTTC ATTTGTTGTT TCTGCCGTCG TTGGTGATTT TGGTGAGGAA
ATTTCATCGA GGTATAACTT TGCTGTATTT ATATCAGCAC CACTTGAAAC TCGTGTTGAA
CGCATAAAGC AAAGAGCTTA TGAACAGCAT GGAGAACGTA TCTGTGAAGG CGGTGATATG
TACGAGCAGC ACTTAAAGTT TGTTGACTTT GTGGCATCAC GGCCTCTATC AAGAACTGAG
CAATGGGCAA AAACTCTTGT GTGTCCTGTC ATACATATTG ATGGCACAAA ATCTATTTCT
GAAAATACAG AACTGGTTGT TGAAGAATAC TTACATAATT TATCCTCCAA AGAGCTGCGA
AGATGA
 
Protein sequence
MSRGIIVFGS NGSGKSTLGR ELARILNFKY MDIEDYHFIK SEIPYTVERT REDRLNLMLA 
DIEKSGSFVV SAVVGDFGEE ISSRYNFAVF ISAPLETRVE RIKQRAYEQH GERICEGGDM
YEQHLKFVDF VASRPLSRTE QWAKTLVCPV IHIDGTKSIS ENTELVVEEY LHNLSSKELR
R