| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2517 |
|---|
| Symbol | |
|---|
| ID | 7259488 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2721025 |
|---|
| End bp | 2722053 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643562403 |
|---|
| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| Protein accession | YP_002458981 |
|---|
| Protein GI | 219668546 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000000000130996 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATGA ATTTTATCAA GAAATTACCG CCGGCGGAAG AAATTATTGC CCATTTGCCT
TTAAGCAAAG AAGTGGCTGA GCTCCGGGAC AAACGGGTGG ACGAGATGAA GAAGATCCTG
ACCAATGAAG ATCAACGGTT CTTATTGATT GTCGGTCCTT GCTCCGCCGA TCATGAAGAT
CCCGTTTGTG AGTATATTGA ACGATTGGCC AAAGTCCAGG AAAAGGTCAA GGATACCCTC
CTCATCGTGC CCCGGATCTA TACCAACAAA CCCCGGACCA CAGGGGAAGG GTATAAAGGG
ATGGTTCATC AGCCGGACCC GGAAAAGGCC CCGGATATGT GCGAGGGTAT TAAAGCCATT
CGCCGCTTGC ATATCCGCGC CATATCGGAA TTTGGGATGC CGGCTGCTGA CGAGATGCTC
TATCCGGAGA ATTACAGCTA TCTTGCCGAT GTCCTGGGTT ACGTGGCCAT CGGAGCCCGT
TCCGTGGAAA ATCAACAGCA TCGCCTTACC GTCAGCGGTG TTGAACTTCC GGTGGGCATG
AAAAACCCCA CCAGCGGCGA TATGACCGTG ATGTTTAATT CATTGATTGC AGCACACAGC
AATCATTCTT TCATCTACAA TGGCTGGGAA GTTGAAACCA CTGGGAACCC TTATGCTCAC
GCCGTGTTAA GAGGGGCTGT GAATGCCAAT GGTGAAAATA TCCCCAATTA TCATTTTGAA
GACCTGATTC GGACCGCTCG GGAATATGAA AGACTGGAAT TGGTTAATCC GGCCATTATC
GTGGATGTGA ATCATGCCAA CTCCATGAAG TGCTTTTATG AGCAGCCCCG TATTTCCGGC
GAGGTGCTGT ACAGCCGTAG GTATGATTCC CTGCTGAAGA AGATGATCAA AGGGCTGATG
ATCGAGAGCT ATCTGGAGGA AGGAAGGCAG GGCATCGGGG AAAACATCTA TGGAAAATCC
ATTACGGATG CTTGCTTAGG CTGGGAGAGC ACGGAGAAGT TGATTTACTC TATAGCTGAA
AATGTCTAA
|
|---|
| Protein sequence | MSMNFIKKLP PAEEIIAHLP LSKEVAELRD KRVDEMKKIL TNEDQRFLLI VGPCSADHED
PVCEYIERLA KVQEKVKDTL LIVPRIYTNK PRTTGEGYKG MVHQPDPEKA PDMCEGIKAI
RRLHIRAISE FGMPAADEML YPENYSYLAD VLGYVAIGAR SVENQQHRLT VSGVELPVGM
KNPTSGDMTV MFNSLIAAHS NHSFIYNGWE VETTGNPYAH AVLRGAVNAN GENIPNYHFE
DLIRTAREYE RLELVNPAII VDVNHANSMK CFYEQPRISG EVLYSRRYDS LLKKMIKGLM
IESYLEEGRQ GIGENIYGKS ITDACLGWES TEKLIYSIAE NV
|
|---|
| |