Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2509 |
Symbol | |
ID | 7259480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 2710778 |
End bp | 2712868 |
Gene Length | 2091 bp |
Protein Length | 696 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 643562395 |
Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
Protein accession | YP_002458973 |
Protein GI | 219668538 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGATA CTAAAGAAAA TTTGCATGAT GCACATAATT TAATTCTAAC CAACACAGGT TGGGAGCAAC TACTGGAATG TAAAAAATTC TTTTTAAAAA ACCATACCCT TGATCCCAAG GAATACGCTT GTATTAGGCT TGAAGTAGCA GAATCCTGGT TGCGCTCTCA TGATTTAGGA GTCAATCCTT ATAAAAGCAG TCTTGCCGAG CATTTGAATT CCAACGAAAT AGCCAGGATC CTGGCTGAAA ACAAAGACCT GATTGAAATT ACCAAAGCCG TTTTTGTTGA TTTAAAAATA AAGGATATCA TGACTTCCAA TTATGCGCTT TATTTATTTG ATAAGAATGG TGTCTTGCTG AGTCATGAGG GAGAAAAGAT CAAGTTAATT TCTGCGGATT ACCCAGAGAG TTCCATAGTG GGCCAGGTAT GGTCGGAAGC AACCGTCGGT ACCTGTGCAC ATGTTTTAAG TATGCATCTA AAGAAGCCGG TATATATTGT CGGGCCCGAA CACTACTGTA CTGTCTTTCA AAATTCCTGT ACATCTGCAG CACCTCTGAC CAATGAGGAT AACGAAATCA TCGGCTACCT GGTTGTAAGC TACCATATTG ATTTTCCCTT GTCCCACGAC TCCTATTATT TAAGCACCTA TCCCCTGGGT CTCATCACAG CTATGGCGGT AGCCGTAGAA AACAAGCTGC GTTTTACCAA GAGCTATCAA TTGCTGAAAA GCGCTCATCA TATGCAGGAA GTAATTTTAT CCGTGATTGA GGAGGGAATA ATTATTACGG ATAACAGGGG GAAAATAATT ACGATCAACA AAGAAGTGGT CAATATCTTC AATACTGCCG AAGAGGAGAT CATAGGCAGG ACTATTGATC GCTTTTTAGG CCCCCAGATT GGTGAGGCGG TTCGGAACAA TGAAACCGTT GATATTGAGG AAGCCATTTG CAGCAATAAT CATGACAAAA GTTATTTAGT GCTCATACGT CCTCTTGATA AACATGGCAA CTATCCCAAC GGTGCGGTTT TGAGAGTTAA TCCTATGGAA ATAATCAATG CCCTTGTTAC CAATCGAACG GGAGCCTTTG CTACCTATAC CTTTGATAAA ATCATTGGTA AAAGCAAAGC CATCAAAGAA ACGATTTCCT TAGGAAAACG CTTTTCCTTA TCCAACGAGA ATATCCTTCT GACTGGCGAG AGTGGAACAG GTAAAGAGCT TTTTGCTCAA GCCATCCATA ATGCCCATCG TCCCCAAGGG CCATTTATTG CCGTAAATTG TGCGGCAATG CCCCGGGAAC TTATTGAGAG CGAACTGTTT GGTTATGAAG GAGGCAGCTT TACCGGCGCT GAACGCAGAG GCAGAGCGGG GAAGATAGAA CTTGCTCATG GGGGCACCCT TTTTCTTGAT GAGATAGGGG ATATGCCCCT CGAGGTCCAG GCTATCCTCT TAAGAGTGCT CGAAGATAAA AAAGTGATGC GAATTGGAGG ACACACTTAT AAAAAGGTTG ATTTCAGGCT GGTTGCAGCC ACGAATAAAG ATTTGGAGAG AATGAGCCAT GAAAATTTAT TCAGAAGTGA TTTGTTTTTC CGGCTATCCA TCCTTTCCAT TCAGCTTCCG CCTTTAAGAA AGCGGGATAA TGACGTTGAG GTTTTGGCAA ATTACTTTAT CGGTAAATAC TGTGCCAAGA TCAAGCGCAA GGCTCCCCTC ATCAGTGAAG AGGCTCTTGA GGTTCTGAAA AGTTATGGGT GGCCTGGAAA TGTAAGGCAA CTTGAAAATA GTGTTATTTA TGCAGTGAAT TTAGCTCAAG GGGATTTAAT CCAATGCAGG CATTTGCCCG AATCATTATA TGCCGCTTCT TCTTCACCAG CAGAGAATTA TAGGGATCCT CCCGGTATGA CCGGCAGCTA CACTCTCGAA AACATCTATA AAATTGATGT TATGGAGAAA ATACTTATTG AAAACGCCCT CTATAAAACC AGAAACAATA TTACCAAAGC TTCCGAACTA TTAGGAATGG CTAAGTCAAC ACTGTATCGC AAAGCAAAAG AGCTTAATAT AGATATGGGA ACATTCAAGA ATTCTGATTA A
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Protein sequence | MPDTKENLHD AHNLILTNTG WEQLLECKKF FLKNHTLDPK EYACIRLEVA ESWLRSHDLG VNPYKSSLAE HLNSNEIARI LAENKDLIEI TKAVFVDLKI KDIMTSNYAL YLFDKNGVLL SHEGEKIKLI SADYPESSIV GQVWSEATVG TCAHVLSMHL KKPVYIVGPE HYCTVFQNSC TSAAPLTNED NEIIGYLVVS YHIDFPLSHD SYYLSTYPLG LITAMAVAVE NKLRFTKSYQ LLKSAHHMQE VILSVIEEGI IITDNRGKII TINKEVVNIF NTAEEEIIGR TIDRFLGPQI GEAVRNNETV DIEEAICSNN HDKSYLVLIR PLDKHGNYPN GAVLRVNPME IINALVTNRT GAFATYTFDK IIGKSKAIKE TISLGKRFSL SNENILLTGE SGTGKELFAQ AIHNAHRPQG PFIAVNCAAM PRELIESELF GYEGGSFTGA ERRGRAGKIE LAHGGTLFLD EIGDMPLEVQ AILLRVLEDK KVMRIGGHTY KKVDFRLVAA TNKDLERMSH ENLFRSDLFF RLSILSIQLP PLRKRDNDVE VLANYFIGKY CAKIKRKAPL ISEEALEVLK SYGWPGNVRQ LENSVIYAVN LAQGDLIQCR HLPESLYAAS SSPAENYRDP PGMTGSYTLE NIYKIDVMEK ILIENALYKT RNNITKASEL LGMAKSTLYR KAKELNIDMG TFKNSD
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