Gene Dhaf_2499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2499 
Symbol 
ID7259470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2696939 
End bp2700187 
Gene Length3249 bp 
Protein Length1082 aa 
Translation table11 
GC content48% 
IMG OID643562385 
ProductNon-specific serine/threonine protein kinase 
Protein accessionYP_002458963 
Protein GI219668528 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0553] Superfamily II DNA/RNA helicases, SNF2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000806643 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTTC CTATTATTAA CGAACTGGAG ATACGCACCC TGGCCTCCAG CAAAAAAGCC 
TACGAGTTGG GAGTGGCCTA TGCCCTTAAG GGCAGGGTAA GCCAATTGTC TCACGATGGG
GAAAGAAACC TGATTTCTGC CGTCGTCATG GGCACCTGGC TTTACGAGGT TGAGATTATC
CTGAGCAGAA ATGGTTCAAT TCATTCCTGT CATTGCACTT GTCCGGCCTT TGCCGAATAT
CCCGGAGCCT GTAAACATGT GATAGCCGCC CTGAAAGCCG TACAAAGAAA GCTGACCGGT
TCTCAGCCAA GATTGGCTGT TGTCAAAGAA TCCGTAGCTG ATTTTATGGC CTTATTTGCG
AACCCCGACC CCAAATCTGT TCGCGAAACT TTAAATCTTG AGTTTGAACT CCAAATAGAA
ATCCATCGTC GGGTCCACGC TCAGCTGCAA ATCAAGGTAG GGCAAAACCG TCTTTATATT
GTGAAGAATT TAGAAGAGTT CCTAGCCGCT ATCCAAGGGG GACACCTACT GACATTCGGC
AAACAATTCA CCTATGATCC CTTCCTGCAC ACCTTCAGTG ATGAGGATCA AACCATTATC
CACATGCTTC AGGAAATGTC AAAGCAATAT GAAGCCTTCA ATGAGCAGCG GAGCTTCCAC
TACGCATCCC CCTTCAGCCA AAAACCTTTC GTTTTGACTG AATATTACTT AGGCAAATTC
TTTGATGCTT TAGGCGCTAA ACACTTCTCT TTAGCCCTCA CCTCCTCAAG AGGCGGGTTA
CCTGAACTTT CCCCCTCCCT CCAGATCATA CGCCAGGATA TCCCCTTGGA TTTTGCCATC
CAGTCTAAAG AGCAGTACCT GACTCTGGCT TTGCAAAGCA AGCTTCCCCT GCAGCTTACC
GAGGATGGAC GCTATTATCT TTATGATCAG AATATCTACC AGGTCTCATC TGAACAACAG
TCCTTCCTGC CTAACCTCAT TAAAGTTATG TCGGGAAAAA ACCTCCAAAC TCTCACCTTT
CCGGACCATC AGAAAGATTT TTTTGCTTCT GAAGCGATAC CCCTTATTGA ACAGATGGGT
TCTGTTGCCA TTGACCCCCA ACTGGCCGAA AAATTCGTAC GGGAAGAGCT GCAGGCCAGG
ATTTATTTTG ATAGGATGGG TGACTACGGC ATCCGAGCCC GCCTGGAATT TCATTACGGG
GATCATATAA TCAATCCCTT CACCTCTCAG ACAGGGGCTA ATCGCCAGGA GGCGGCTGAC
GCGCAAATTC TTATCCGCAA TATCGAGAGA GAAAGAAAAA TACTGGGGAT CTTTGAGCAA
GCAGAATTTA TCGTTTCCCA AGGGGTAATA AGTTTGGAAG ATGATGAAAA GCTCTTTGCT
TTCATCACCA CCTGGCTTCC CCAGCTCCAA GATTGTGCGG AAACTTTCTA TTCGGATGAC
TTCAAACTTA CCATTCGCAC TTCCACCAGC TTTTCCGGCC GGGTGCGTTT GGATGAATCC
TCAGACCTGC TGGAGATATC CTTTCAATAT AGTGATATCG ACCGGGATGA GCTGACCCAT
ATCTTTCATT CTTTGCAGGT GAAGCGGAAC TATTACCGGC TGCGGGACGG CTCCTTTCTC
GACCTGAGGC AGCCTGAACT GGAATCTATG GCCATGTTTC TTGAGCATTT AAACCTCAGG
GGGGAGGATT TGAACGAACA GACCCTAAGG CTTCCCAAGT TCAGAGCCAT GTATATCGAC
AGCTTTTTGC GTCAAGCCAA TTTACCTGGA ATTCAGCGCA ATAAAGCCTT TAAACAATTA
GTCCAAAGCA TTCTTGAGCC CCAGGACGGG GAATATGATC CGCCGCCATC CCTTATGAGT
GTACTGCGGG ATTACCAGAA GACGGGATTC CGGTGGCTTA AAACCCTGGC TGCTTATGGT
CTGGGCGGCA TTCTGGCCGA TGATATGGGA CTGGGAAAAA CCTTGCAGAC CCTGGCCTTT
ATCTTGTCCG AAAAGCTTTC CTCCCCTGCT CTGGTGGTTG CCCCCACTTC TCTCATCTAT
AACTGGCAGG CGGAAGGGGA AAAATTCGCG CCGGGCTTGC ATATCCTGGT GGTCGATGGC
TCACCCCAAG AACGCCAGGA GCAATTAAAG GGCCTCGATC AAGCTGATTT AGTCGTCACC
TCCTATGCTC TGCTCAGACG GGATATCGAG ACCTTTGCCC AGGTTGACTT TTCCTACTGC
TTCCTGGATG AAGCTCAGAA TATCAAGAAT CCCCAGACCT TGAACGCCAA ATCTGTTCAG
AGAATTAAAG CGAAGAGTTA TTTTGCCCTG ACCGGCACGC CCATAGAAAA TTCTCTTGCC
GAACTTTGGT CCCTCTTTAA TTTTTGTCTG CCGGGCTATC TGCTCTCTCA CCAGGAATTT
CAGAAAAAGT ACTCCACGCC GATCATTAAA GACGGCGATC CCCTGGCCCT TAGGGAATTA
AGCCGGCATA TCAAGCCTTT TATCCTGCGC AGGCTTAAAA AAGACGTTCT GAAAGAACTG
CCCCCGAAGA TCGAGACGGA AATCAAAGCC GCCTTAACCG AGGAGCAGCG CAAAATCTAT
CTGGCCTATC TTCAGCAGAC CAAAAGCCAG ATTGCTCAAG AACTTGCCAC TCATGGTTTT
GCCAAAAGCC AGATCCAAAT TCTCGCTGCC TTAACCAGAC TAAGGCAGAT CTGTTCCCAT
CCGGGAATGT TCATCGACAA TTATACGGGG GAAAGCGGAA AAATGCTCCT CTTCCAGGAA
CTCTTAGAGG ATAGTTTAGC CGGCGGCCAC CGGGTGCTGG TTTTTTCCCA GTTTACCTCC
ATGCTGGATA TCATCGGGGA GTATCTCCAC TCTGAAAACA TCGACTATTT TTATCTCAGT
GGGTCCACAA AAGCTCTTGA ACGTTCACGT ATGGCCGCTT CGTTCAATAA CGGCGAGGGT
CAGGTTTTCC TGATCTCCTT AAAAGCCGGT GGAACGGGGT TAAATCTGAC CGGTGCCGAC
ACCGTAATTC ATTTCGACCC CTGGTGGAAT CCGGCTGTTG AAGATCAGGC TACAGACCGG
GCCCATCGCA TTGGACAGCA GAATTCTGTC CAAGTGATTA AGCTCCTCAC CCAAGGGACC
ATTGAAGAAA AAGTCAACGC CCTGCAAGCT AAAAAGAAAA AGCTCATTGA TTCCGTCATC
CAACCCGGTG AAACTATGCT CTCGAAATTG ACGGAGAAGG AATTGCGAGA GCTTTTCGAG
TTAAACTAA
 
Protein sequence
MPFPIINELE IRTLASSKKA YELGVAYALK GRVSQLSHDG ERNLISAVVM GTWLYEVEII 
LSRNGSIHSC HCTCPAFAEY PGACKHVIAA LKAVQRKLTG SQPRLAVVKE SVADFMALFA
NPDPKSVRET LNLEFELQIE IHRRVHAQLQ IKVGQNRLYI VKNLEEFLAA IQGGHLLTFG
KQFTYDPFLH TFSDEDQTII HMLQEMSKQY EAFNEQRSFH YASPFSQKPF VLTEYYLGKF
FDALGAKHFS LALTSSRGGL PELSPSLQII RQDIPLDFAI QSKEQYLTLA LQSKLPLQLT
EDGRYYLYDQ NIYQVSSEQQ SFLPNLIKVM SGKNLQTLTF PDHQKDFFAS EAIPLIEQMG
SVAIDPQLAE KFVREELQAR IYFDRMGDYG IRARLEFHYG DHIINPFTSQ TGANRQEAAD
AQILIRNIER ERKILGIFEQ AEFIVSQGVI SLEDDEKLFA FITTWLPQLQ DCAETFYSDD
FKLTIRTSTS FSGRVRLDES SDLLEISFQY SDIDRDELTH IFHSLQVKRN YYRLRDGSFL
DLRQPELESM AMFLEHLNLR GEDLNEQTLR LPKFRAMYID SFLRQANLPG IQRNKAFKQL
VQSILEPQDG EYDPPPSLMS VLRDYQKTGF RWLKTLAAYG LGGILADDMG LGKTLQTLAF
ILSEKLSSPA LVVAPTSLIY NWQAEGEKFA PGLHILVVDG SPQERQEQLK GLDQADLVVT
SYALLRRDIE TFAQVDFSYC FLDEAQNIKN PQTLNAKSVQ RIKAKSYFAL TGTPIENSLA
ELWSLFNFCL PGYLLSHQEF QKKYSTPIIK DGDPLALREL SRHIKPFILR RLKKDVLKEL
PPKIETEIKA ALTEEQRKIY LAYLQQTKSQ IAQELATHGF AKSQIQILAA LTRLRQICSH
PGMFIDNYTG ESGKMLLFQE LLEDSLAGGH RVLVFSQFTS MLDIIGEYLH SENIDYFYLS
GSTKALERSR MAASFNNGEG QVFLISLKAG GTGLNLTGAD TVIHFDPWWN PAVEDQATDR
AHRIGQQNSV QVIKLLTQGT IEEKVNALQA KKKKLIDSVI QPGETMLSKL TEKELRELFE
LN