| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2498 |
|---|
| Symbol | |
|---|
| ID | 7259469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 2696193 |
|---|
| End bp | 2696903 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643562384 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002458962 |
|---|
| Protein GI | 219668527 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.00673137 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAATTTAG TTCAAGCCAA CATCACGTCC GGCGGATACC TAAAGAAGGA CCTCATCCTC
AAGGATATTT CCTTTGAGGT AAAGCCCGGT GAGCTTGTCG GATTAATTGG GCCTAACGGT
GCGGGAAAAA GCACGATCCT CAAGGCGATT ATGGGACAGC TTCCTTATCT GGAGGGAAAG
GTTGAATTTG AGAATGCCCA CACCCATTAT GCCTATATTC CGGAACAACC GGTCCTCTAT
GATAATCTCA CCTTGTGGGA GCATTTAGAG TTCGCCGCAG CCGTGGGAAA AATGAGCCAG
GAAACCTTTG TGCCCAGAGT TGAAGAATTG CTGAAGCTCT TCCGCCTCCA TAAGGAGAAA
CACCAACTCC CTGTCACCTT TTCCAAAGGA ATGCAGCAAA AAGTCATGCT CATCCTCGGC
TTTTTGCTGC GCCCTCCTTT ATATATTGTA GATGAGCCTT TCATTGGCTT GGATCCCCAC
GGCATGCGGG ACTTTCTCCA GCTCGTGGAC CAAGTGCGTC AGGATGGAGC GGGTATCCTG
ATGTCCACCC ACTCCCTGGA TACGGCGGAA AAGATCTGCA CTTCTTTCAT CCTTATTCAT
GAAGGAACCA TCATCAGTCA GGGAAATCTG GAGGATATAC GCCGGCAGAG CCGCTTGCCG
GAAGGCTCTC TCTTCGACTG CTTTATCAAC CTCCTGGAGA TACAGCCATG A
|
|---|
| Protein sequence | MNLVQANITS GGYLKKDLIL KDISFEVKPG ELVGLIGPNG AGKSTILKAI MGQLPYLEGK
VEFENAHTHY AYIPEQPVLY DNLTLWEHLE FAAAVGKMSQ ETFVPRVEEL LKLFRLHKEK
HQLPVTFSKG MQQKVMLILG FLLRPPLYIV DEPFIGLDPH GMRDFLQLVD QVRQDGAGIL
MSTHSLDTAE KICTSFILIH EGTIISQGNL EDIRRQSRLP EGSLFDCFIN LLEIQP
|
|---|
| |