Gene Dhaf_2486 details

Gene Information

• Locus tag: Dhaf_2486
• ID: 7259457
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 2685498
• End bp: 2685986
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 643562372
• Product: 3-isopropylmalate dehydratase, small subunit
• Protein accession: YP_002458950
• Protein GI: 219668515
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR02084] 3-isopropylmalate dehydratase, small subunit; [TIGR02087] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCAAAG CCTGGAAATT CGGAGATGAT ATCGACACCG ATGTCATTAT ACCGGCACGC 
TATCTAAATC AAAACACTCC CGAGCATTTA GCGGCTCATT GCATGGAAGA TGCCGACGCC 
AATTTTGCTA AAGAAGTAAA GTCCGGCGAT GTGATCATCG GCGGCAAAAA CTTTGGCTGC 
GGTTCTTCCC GGGAGCATGC TCCGGTAGCC ATTAAGGCAG CGGGGGTGAA GGCAGTCATC 
GCCGATTCTT ATGCCCGGAT TTTTTACCGG AACTCCCTGA ACATTGGTAT GCCTATTCTG 
GAATGCCCCG AGGCAGTTCA AGGAATTGAA GCAGGGGATG AGGTCTCTGT GGATTTGGAG 
ACCGGAAAGA TCGTCAATCT GACCAGAAAT ACTGAGTTTG AAGCCCGGCC TTTCCCACCC 
TTTATGCAGG ATCTGATCAA AGCAGGGGGA CTTATTCCAT ATGTGAAGGG GAGACAAGAA 
CATGCCTAA 

 

Protein sequence

MAKAWKFGDD IDTDVIIPAR YLNQNTPEHL AAHCMEDADA NFAKEVKSGD VIIGGKNFGC 
GSSREHAPVA IKAAGVKAVI ADSYARIFYR NSLNIGMPIL ECPEAVQGIE AGDEVSVDLE 
TGKIVNLTRN TEFEARPFPP FMQDLIKAGG LIPYVKGRQE HA