| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2479 |
|---|
| Symbol | |
|---|
| ID | 7259450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | - |
|---|
| Start bp | 2676137 |
|---|
| End bp | 2677432 |
|---|
| Gene Length | 1296 bp |
|---|
| Protein Length | 431 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643562365 |
|---|
| Product | homoserine dehydrogenase |
|---|
| Protein accession | YP_002458943 |
|---|
| Protein GI | 219668508 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0460] Homoserine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00000000845982 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTCG TTAAGATTGG ACTGCTGGGT CTCGGAACCG TCGGCAGTGG CGTAATTCAG
ATCCTTGAGC AAAATGCTAA TGATATACAG AACCGTTCCC TAAGTCAGAT TAAAGTCTCC
AAGGTCCTGG TGCGGAACCT TAAGGCTCCC CGCTCAATCG CAGGGGATTT TACTCTAACC
GATCAAGCCG CCGATGTTCT CACCGACCCC GACATCAGTA TTGTCGTCGA AGTGATGGGC
GGCATTGAAC CGGCCAAAAC CTATATATTA GAAGCTTTTA AACAAGGGAA GAATGTGGTG
ACCGCCAATA AGGACCTTTT GGCCCTTCAT GGGCAAGAGC TTTTGGATGC GGCTAAAGAA
GCTGGCAAAG ATCTTTATTT TGAAGCCAGT GTAGCCGGCG GCATTCCTAT TATCGCCGCC
CTGAAGCAGT CTCTGGCCGG GAATAGAATC TCTGAAGTCC TGGGGATTAT TAACGGCACC
ACCAACTATA TCCTGACCGC TATGACCGAG CAGGGCCGGG ATTATCAGGA AGTCCTGAAG
GAAGCTCAAG AGTTAGGTTA TGCGGAAGCC GACCCGACCG CAGATGTGGA CGGACTGGAT
GCCGCCCGCA AGCTGGCCAT CCTCGCCTCC ATCGCCTTTA ACTCCCGGGT CACCGTCAAT
GATGTCTATG TGGAAGGGAT CGCCAAGATC ACTTCCGAAG ACATCGCCTA TGCCCGTGAA
CTCAATTCCA CCATCAAACT TCTGGCTGTG GCTAAAGCTC AGGCCGACGG CATCGAGGTT
CGTGTCCACC CTGCCTTTGT GCCCGACAAC CATCCCCTGG CTGCTGTCAG CGGAGTTTTT
AATGCTATCT ATGTGGTGGG AGACGCCGTT GGCGAAACCA TGTTCTATGG CCGGGGTGCC
GGGTCCCTGC CCACTGGAAG TGCCGTTGTC TCCGATATCA TTCAAGTGGT CCGGAATATC
AATGCGGATT CTACGGCTAA CATTAATTGC ACTTGTTACA ATGAATTAGC CATCAAAAGC
GAACAGGATT TTAAAAGCGC TTTCTATATC CGGCTGCGGG TCAAGGATGA ACCCCGGGTT
CTGGCTACCC TAGCCCTGCT TTTCGCCGAA GCCGGGGTGA GCTTTGCTTC CATCATTCAA
AAACAGAAAA AACGCCAGGA AGCGGAAATC GTCCTGGTCA CCCACCCCAC TCAGGAATCC
TGCTTGCGTG AAGCTCTGGA TTCGGTCCGG GCCTACAGCA AAGTGCTCTC CATCCACAAT
GTGATTCGTT TTGAATCAGG TGAGCATTAC GACTAG
|
|---|
| Protein sequence | MQVVKIGLLG LGTVGSGVIQ ILEQNANDIQ NRSLSQIKVS KVLVRNLKAP RSIAGDFTLT
DQAADVLTDP DISIVVEVMG GIEPAKTYIL EAFKQGKNVV TANKDLLALH GQELLDAAKE
AGKDLYFEAS VAGGIPIIAA LKQSLAGNRI SEVLGIINGT TNYILTAMTE QGRDYQEVLK
EAQELGYAEA DPTADVDGLD AARKLAILAS IAFNSRVTVN DVYVEGIAKI TSEDIAYARE
LNSTIKLLAV AKAQADGIEV RVHPAFVPDN HPLAAVSGVF NAIYVVGDAV GETMFYGRGA
GSLPTGSAVV SDIIQVVRNI NADSTANINC TCYNELAIKS EQDFKSAFYI RLRVKDEPRV
LATLALLFAE AGVSFASIIQ KQKKRQEAEI VLVTHPTQES CLREALDSVR AYSKVLSIHN
VIRFESGEHY D
|
|---|
| |