Gene Dhaf_2478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2478 
Symbol 
ID7259449 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2675204 
End bp2676097 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content56% 
IMG OID643562364 
Producthomoserine kinase 
Protein accessionYP_002458942 
Protein GI219668507 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0083] Homoserine kinase 
TIGRFAM ID[TIGR00191] homoserine kinase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.979123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCGTG TCAGAATACC GGCCACCTCT GCTAACTTAG GGCCAGGCTT TGATTGTCTT 
GGTATGGCCC TTTCTTTATA CAATGTTGTC CAAATAGAAG CTGCTGACTC TTTTCAGATC
GCTTTAAAAG GGGATTATAC TGCAGGCATC CCTGGGGATG AGACCAATCT CGTTTGGCAA
AGTATGTGCA ACCTATGGGA GGCCATTGGC TTTGAGATAC CAACGGTTTC CTTGGAATTG
GAAAACAACA TCCCCCCCAC CCGCGGCATG GGAAGCAGCT CCGCAGCCAT CGTCGGCGGC
TTGGTAGCAG CCAATGAATA TGCGGGAGGA GTCTTGAGCA AGCAGCAAAT CCTTCAGATC
GCCAATCGGA TCGAAGGGCA TCCCGATAAT GTGGCTCCGG CACTTTTAGG GGGAGTTACC
CTGGCCGTCA CCGCAGAGGC CTCCGTCATT GCCAGGACAG TGCATTCCCA GCCTCAATTC
ATGGCCTTAG CCATCGTTCC GGACTTCTAT CTGTCCACCG AAAAAAGCCG CAATGTGCTG
CCTGCCTCCA TTTCCCGGGC AGATGCCGTC TATAATCTCT CCCGGACAGC CCTGCTGGTG
GAAGCCTTGA TCCATGAGAA CTACGAGCTC CTTAAGGAAG GTATGCAGGA TCGGCTGCAC
CAAAACCAGC GGGCCAGCCT GGTCCCCGGC CTTGGGGAAA CCTTGCAGGT GGCACTGGAT
TCCGGGGCCT ACGGTTCCGC TCTCAGCGGT TCCGGCCCTA CCATCCTGGC TTTGGTCTCT
TCCCACAGGG CTGAGCAGGT TTCCCAAGCC ATGGTAGACT CCTTGGCAGC TCATGGCTTG
ACAGCCAAGG CCTACCTCCT CTCCGTCGAC TCGGAGGGGG CGGCGGTTAT TTAA
 
Protein sequence
MVRVRIPATS ANLGPGFDCL GMALSLYNVV QIEAADSFQI ALKGDYTAGI PGDETNLVWQ 
SMCNLWEAIG FEIPTVSLEL ENNIPPTRGM GSSSAAIVGG LVAANEYAGG VLSKQQILQI
ANRIEGHPDN VAPALLGGVT LAVTAEASVI ARTVHSQPQF MALAIVPDFY LSTEKSRNVL
PASISRADAV YNLSRTALLV EALIHENYEL LKEGMQDRLH QNQRASLVPG LGETLQVALD
SGAYGSALSG SGPTILALVS SHRAEQVSQA MVDSLAAHGL TAKAYLLSVD SEGAAVI