Gene Dhaf_2467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2467 
Symbol 
ID7259438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2662761 
End bp2663267 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content46% 
IMG OID643562353 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002458931 
Protein GI219668496 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.924646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGATT CAGTCATGCA AAAGGTCTAC GAACAGCATA AAGATGCCGT CTATGCTTAT 
TTGTTAAGCC TTACCCATAG CAAAACCCTT TCAGAGGATT TGACCTCGGA GGTTTTTATC
AGCGCCATCA AATCCCTGCC CGGGTTTAAG GGGAATTCCG ATCTTAAAAC CTGGCTGTTC
TCTATAGCCC GCTATACATG GTATGGGCAT TTAAGAAAAA GCAAAAAAGA GCTTACCCCG
GAAGATTTGC TGGAAGTCTA TTTTTCCGAT CCGGCCGGTC TGGAATCAAC ACTCCTCACC
CAGGAGCTGC TGGACAGGAT TCATGATTTG CTGAACCGGG AGCCTGACAA AAACAGAGAC
ATCGTTTTGA TGCGGATTGA AGGCTACTCC TTTTATGAGA TAGCCCGGAA GCATCAGATT
TCCGAAAGCT CGGCAAGAGT CCTTGATTTT CGCACCAAGC ATAAAATCAG AACGATCCTG
CTCAAGGAGG GATATAGCTA TGAGTAA
 
Protein sequence
MADSVMQKVY EQHKDAVYAY LLSLTHSKTL SEDLTSEVFI SAIKSLPGFK GNSDLKTWLF 
SIARYTWYGH LRKSKKELTP EDLLEVYFSD PAGLESTLLT QELLDRIHDL LNREPDKNRD
IVLMRIEGYS FYEIARKHQI SESSARVLDF RTKHKIRTIL LKEGYSYE