Gene Dhaf_2434 details

Gene Information

• Locus tag: Dhaf_2434
• ID: 7259405
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 2626176
• End bp: 2632799
• Gene Length: 6624 bp
• Protein Length: 2207 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 643562320
• Product: cell wall/surface repeat protein
• Protein accession: YP_002458898
• Protein GI: 219668463
• TIGRFAM ID: [TIGR02543] Listeria/Bacterioides repeat

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAAAC GACTACTAAG TATGTTTCTG ACGCTGTGCA TGATAGTGTC CATGCTGCCG 
GTTTCGGCAA TGGCGGAAGA AATCCATACG ACCATTGGCG GGAGCGGAGA AATTATCAGC 
TTTGCACCGC TGACAGAAAC AAAAAAAGCG GTATCACTCG GAACATCCAT TGAAGATTTG 
GAGTTGCCCG AAACGCTGAC CGCCACGGTG CGGACGGCCA TGCCTGCCGA TGAAAATTCC 
ACACAGGATT CCGGCAGCCC GGAAACGGCA ACTCCCACAA CGACCACCGA GCCTAAATGG 
AAAGAAACCA CCGGGGATAT TCCAGTGGAA TGGAATTCGT CTGACTACGA TCCGAACATC 
GAGGGCGAAT ATGCCTTTAC GCCGGTGATC GTGGGCTATA CGGTCAGCGC CCCGCTGCCG 
GAGCTTACCG TGGCGGTGGG TGAACCCGTA CTTGATATGC GGGGAATCGG GCTGTTGTCG 
ATTGAAGACA CCGATGTTGC CGCAATCGAC GACACAGGCT ATGCCACCCT GCAAGAGGCT 
GTGAATGCCG TTGCAGAGGG GCAGACTATT AAGCTGCTGG ATGACATCAA CCTCACAGCT 
ACTGTCGAAA CCCTTTCTTC TTCGACTAAG AGCTTCACCC TTGACCTCAA CGGCAAGACG 
CTGAGGTCCT CAGACAAGTT GAACCTCCTG CACCGTGGCA GCGGCACACT AACCGTTACC 
GATAGCAAAG GTGGCGGCAA GATAGAGCAT GGCTCCATCT GGCAAGCCAT TAGTAACCTG 
AACTACGGAA CCATCATCGT ATCTGATACC GAGATAATAA CCACCAGCGG AGATGGACGT 
GGAATTGTCA ACGTCGCTGG AACCCTCGTC GTTTCTCGCA GCAAGGTAAG CGGAGGTACC 
GGTATTGAAA ACAGTTCCGG TACAGTGACT ATTTCCAACA GTACAATAAC GGGAACATCA 
TCTTCCGGTA ACGCTTATGG CATTTATAGC ATACAAAAAT GCACTATAAA TATTTCCGGC 
AGCACAATAT CGGGAGAAGG AAACGGCTCC GGTCTATACG GCATTAGAAA TACAAACGGC 
GGCACAGTGA ATGTTTCCGG AAGTCCCTCC GTCATCAAAG GCAAAAGCTA TGCTATGCAT 
GGTGTGACGC CGACGCTGAA CGGCGTAATA GCCACGGCAA GCACCGACTA CGATGGGGGC 
AGTGCAGTCG CTTATGACGC GGGGAGCATC GCAAGCTACA AATACTTAAA ATTTGAGCCT 
GCCCCTGTTG TCAACTATGA CCTATGGGTG GGCGGCGTGC GGGTTACCAG CGATAACAAA 
GATGGTATCA CCGGCGCAGG TATTACTGGA ACCGTCATCT ATGACAGTGA CACAAATACC 
CTCACACTAA ACGGCGCTAC TATCAACGGG GCCTATGAAG GGACATGGAT TGACAGTACT 
ACATCCGCCT ATTACGGCAT TTACGCCGAC ACCGCTTTGA AGATTGAGAT GGTGGGAGAC 
AGCACCATCA TGGGCAAAAA TCTGGCCAAT ATCGCCAGCA TCGGCATCTA TACCGGTAGC 
ACGCTGAACC TCTCCGGTAG CGGCAGCTTG TACGTCAGCG GCGGCACAGG AAAATTTAGC 
GTCGGCATAT ACAGCGGGGG AAGTATCACA ATTGAAGGCG GAAGGGTTAC GGCTGTCGGC 
GCAGCAGCAA CCCAGACCTC CATCGGCATA GCCTCTAATG GCAATATAAC GATTCACGAT 
GGAGAAGTAG AAGCGTTAGC GAACACTGGT GCAAGCATAT CTTGGGGAAT GATGGCAACC 
AACGCTATCA CGATTAACGA TGGCGAGGTA ACTGCAAGCG GAAAAACAGG CTTGCACACA 
AATGCAGCAG CAGGCTCCGT CACAATCTCC GACGGCATGG TAACTGCAAA TGGCTCTGAG 
GTAGGCATAG CCGGTGCGGT AACTGTCACA GGCGGCACGG TGACAGTCAA AAGTGATGCG 
AAGGCGCTGA ACGGCAGCTT AACGACTTCG GGTTATGAGG GATGCATCGT TACTGCGGGA 
GCCAATAAAA ACGGAGATGG TGCGGGTACG TATAATGCTG CGAACCTCGC AACCTATAAA 
TATATCAAGG TGGAGTCTGC CTCCACACCG CCTGTGCTTA CGGAAGTTGG CGACCGCACA 
GCTCTCCAGT CTGCCATAAC CGGTGCGACA GTCGATTTGG ATTTGAAGCT TTCCGACAGT 
TACATCGACA CTGTTGGAAA ACTCACTATT CCCGGCACTT GTAGCTACAA CATCACCATT 
GACCTAAACG GCAGAACGCT TGCCGGCGCT TCTGTTTCTG CCATTGAATA TTTGGGCAGC 
GGTACGCTGA CCATTACCGA CAGCGCGGGC GGCGGAATGG TGACCAGCAA CGCAATGGGG 
ACGATTTATG CCAACGGTGC CGGCACCGTG AACCTTTCCG GCGGCACAGT GCGAACGGCA 
GGGAGTACTG AAAGTGTTGC GATTTGGGTC GGCGGTAATA AAACCTTAAA TATTACCAGC 
GGAACGGTGA TTGGGATTGG GTATGCCAAT TATGCTATAT ACAGCAAAAA CGGAACCGTA 
AATATTTCTG GTGGAACGGT GAGCGCGACA GGGATTAATG GGAAAGCGAT TTGTGGTGAA 
ACCGGTTCCG CCGGCCAATT GAACATATCA GGGGGAACGG TGAGCGCGAC GTGGACTGGC 
GGTATTGCGA TTGACCACCA AAACACTACT ATTCAAACCG GAACAACCAA TATTATTATC 
CAAGGCTCCA GCAGAGCAAT GACATCGCCG CCGACGCTGG TCGGCGGCGT GCAGGACGGG 
GCAAGCACTA ATTACGATGG GAGCGGTTCG GTCGCCTACA ACGCGGCGAA TATCGCAACC 
TACAAATACT TAAAGTTTGG GCTTGACGTC ATATCGCCTG TGCTTTCATC AGGGAGCGTA 
AACCGCACAA GCGACACAGC GGCTACAATC GACTTTACCA CCGACAAGGC GGGTACAGCG 
TATTACCTTG TTGTGAACAG CGGCGTGTCC GCTCCAACGA GCATGGCGGT AAAAGCGGGT 
ACTTCTCTCG ATTCCGTAAG CGGAACAGTG ACGGACAAAG CCGCTACGCT GACGGCGGGG 
GCAAAAGATA TTTATGTGGT CGTGGAGGAT TCGGCGGGTA ATATCAGCAC CCCGTTAAAA 
ATATCGGTGG CGGCGTATGT CGCGCCAGAC ACCACGGCCC CCACGGTTAC TTCGGTAACG 
GTGCCTACCA ACGGAACTTA TTTGCCCGGA ACTTATTTGG ACTTCACAGT AAATTTCAGT 
GAGAGTGTGG CTGTCACCGG CTCACCGTAC ATCTCGCTGA CGATTGGTTC AAATTCCAGA 
AATGCAATTT ATCAAAGCGG CAGCGGCACA ACGGCGCTGG TCTTTCGTTA TACGGTACAG 
GCGGACGACA GCGACAGCGA CGGCATCACC GTCGGCGTGT CGTTAAACGC CAGCGGCGGC 
ACCATCCGGG ATGCCGCAGG AAACAATGCA AATTTGGCGC TGAACAGCGT GGGCAGCACG 
GGCGGCGTAC TGGTGAATCC CCCGGCTCCT TCTATCACCA GCCAGCCATC CCCTCAAACG 
GTGGATGAGG GTCAGACGGC TACCTTCTCG GTTACGGCAA CCGGAGTGGG TTTATCCTAC 
CGGTGGCAGG TTAACACCGG CAGCGGCGTT TCCAACATTT CAAACGGTGG AGTATACAGC 
GGAGCTGGAA CGTCGACATT GACCATCACC GGGGCAACAG CAGGGATGAA CGGCTATCAA 
TACCGCGCCG TTGTAGAAGG TACATACTTG CCTGCTGCTA CCTCAAATTG GGCCACGCTA 
ACGGTAAACG CCGCGCCTAC CTACACCATC ACAGCCAGTC CGACCAGCAA GGATTTTGGA 
TCGCTGACAA TCGGCTATAC TGCCCCGGCA GCGCAGACCG TGACCATCAC AAATACCGGA 
AACTCCAGCG TGACGCTGAC CCAGCCGACC AGCACCAACT ATACCATCGG TGCACTCAGT 
ACCACCACAC TGGCGGCAAA CGGCACAGCC ACCTTTACCA TTACGCCGAA AACTGGTCTT 
GCAATAGGGA ATCACGATGA AACCCTGACC GTAAGCACCG ATCATGGCAC CAACGCTACG 
GTGGGATTGA GTTTTGAAGT TACGACGGCT CCTACTTATA CCATCATCGC TGACCCGGTA 
ACCAAGGATT TTGGTTCTCT GACAATCGGC TACAGTGCCC CGGCAGCGCA GACCGTGACC 
ATCACAAATA CCGGAAACTC CAGCGTGATG CTGACCCAGC CGACCAGCAC CAACTATACC 
ATCGGTGCAC TCAGTACCAC CACACTGGCG GCAAACGGCA CAGCCACCTT TACCATTACG 
CCGAAAACTG GTCTTGCAAT AGGGAATCAC GATGAAACCC TGACCGTAAG CACCGATCAT 
GGCACCAACG CTACGGTGGG ATTGAGTTTT GAAGTTACGA CGGCTCCTAC TTATACCATC 
ACCGCTGACC CGGTAACCAA GGATTTTGGT TCTCTGACAA TCGGCTACAG TGCCCCGGCA 
GCGCAGACCG TGACCATCAC AAATACCGGA AACTCCAGCG TGATGCTGAC CCAGCCGACC 
AGCACCAATT ACACCATCGG CACACTCAGT ACCACCACAC TGGCGGCAAA CGGCACGGCT 
ACCTTTACCG TTGCACCGAA AGCTGGACTT GCAGTGGGTA ATTATAATGA AACGCTGACC 
GTAAGCACCG ATCATGGCAC CAACGCTACG GTGGAATTGA GTTTTGAAGT GACGGCGGTT 
CCCTACACCG TCACCTTCAA CCCGAACGGC GGCACGGTCA GTGAAGCTTC ACGCTCGGTT 
GCATCTGGTA CGGCGGTAGG GGCACTCCCG ACACCGACAC GCTCCGGCAG TTACAGCTTT 
GACGGCTGGT ATACGGCGGC AAGCGGTGGA ACTCAAATCT CCGCAAGCAC AACCGTCAGT 
GCAAATGTGA CCTACTATGC CCATTGGACT TACACCGGCG GCGGTGGCTC TGGAAGTGGC 
GGCGGCAGCT CCTCAAACGA CAACAGCAGC CCTGTCATCG TCACCCCACC CGCACCGGAT 
AAGCCGAATT CACCCACTCA GGGAGAAATC AAGGTTCCCG GCACAGTGGA CGGCAAGGGC 
AATGTCACAG TGAGCATCAT TGACAAAACT GTGACTGACG CTTTTAACAA GGCATTGGCT 
GAGGCCAAGA AAAACGGCAC GGAGCAAAAT GGCATCACGG TGGTTCTCCG TGTGGATACC 
GGCAACAAAA CCGGCTCCAA TGTTACGGTC AATCTGCCAA AGGCCGTGCA GGATACCATC 
ATTGCAAAGA AAATCGTCAA CACCATTGTG GTGGTAGACA ACCCCGACAT CAGAGTCGGT 
ATGGATTTGG CGACCGTACA GGAAATCAAT AAGCAGGCAA AATCTGATGT AAATATCACC 
GCCACCCGCA CGAACAGCGG CAAACTAACA GGCGAGGCGA AAAAGGCAAT TGGCAGCCGT 
CCGGTATTTG ACCTCAAGGT GAACTACGGC AACGGCAAGG CGGTCAGCAG CTTCGGCGCA 
GGCAGCGTAT CGGTAACCAT CCCCTATACC CTCGGCGCAA ATGAAAAGGC AGGGAATGTG 
CAGGCTGTGT ATGTGGACAG CAAGGGTAAG GTGCATTGGC TGGTAAACTC GGTCTATGAC 
AGTGTGGAAA AGGTACTGCG CTTCAGCACC GATCATTTTT CCATCTACGG CATCGGCTAT 
AAACAGGCCA ACACCGCATT TACTGACATT GCAGGCCATT GGGCAAAGGA AGATATTGAG 
TTTGTGGCAA GCCGTGGGCT GTTCGGCGGA ACTTCTGAAA CCAAGTTCAG CCCGAACACC 
GCCATGACAA GAGGAATGTT CGTCACGGCG CTGGGGAGGC TTGCAAACGC CGATGTGAGC 
GGTTACGCAA AGAGCAGCTT CAGCGATGTG CAAGACGACG CCTACTATAT GGGCTACATT 
GAGTGGGCAA GCAAAAATAA CATTGTAAAC GGGGTTGGCA ATGGAAAGTT TGCCCCGGAT 
CAGTCCATCA CCCGTGAGCA GATGGCGGTC ATTATGAGCA ATTATGCCAA GACCATCGGT 
TATACTCTGC CGAAGGTTCA TATCGAAAAT ATCTTTACAG ATAACGCTAA AATCAGTACC 
TACGCCAAGG AAGCCGTGAA GCAGATGCAA ATGGCAGGCG TGATCAGCGG CAAAAACGGC 
AATCTCTATG ACCCGCAGGG TACGGCCACA AGAGCCGAGG TGTCCGCTGT TCTGCGCCGC 
TTTGTGGAGC TGGCAATTTC CAGCGACACA GCGCAGGGCT GGTCCATGAA CGATTCCGGC 
AAATGGATGT ACTTCAAGGA CGGCAAGCCC CTCACTGGCA AGCAGGACAT CGACGGGGCG 
ACCTATACCT TTGACCAGTA CGGTGTGACA GCGGATGTGC CGAAGAATTT GCGGTACACC 
ACCTACACCG TGCAAAAGGG CGATAGCTTC TGGAGCATAT CCCGCAAGCT GGGCTGCCCC 
ATGAGCGAGC TGGAACGACT GAACAACAAA AGCCGGTTTT CTCTTATTCT CCCCGGCGAG 
GTGCTGAGAG TACCGGAGAA GTAA 

 

Protein sequence

MNKRLLSMFL TLCMIVSMLP VSAMAEEIHT TIGGSGEIIS FAPLTETKKA VSLGTSIEDL 
ELPETLTATV RTAMPADENS TQDSGSPETA TPTTTTEPKW KETTGDIPVE WNSSDYDPNI 
EGEYAFTPVI VGYTVSAPLP ELTVAVGEPV LDMRGIGLLS IEDTDVAAID DTGYATLQEA 
VNAVAEGQTI KLLDDINLTA TVETLSSSTK SFTLDLNGKT LRSSDKLNLL HRGSGTLTVT 
DSKGGGKIEH GSIWQAISNL NYGTIIVSDT EIITTSGDGR GIVNVAGTLV VSRSKVSGGT 
GIENSSGTVT ISNSTITGTS SSGNAYGIYS IQKCTINISG STISGEGNGS GLYGIRNTNG 
GTVNVSGSPS VIKGKSYAMH GVTPTLNGVI ATASTDYDGG SAVAYDAGSI ASYKYLKFEP 
APVVNYDLWV GGVRVTSDNK DGITGAGITG TVIYDSDTNT LTLNGATING AYEGTWIDST 
TSAYYGIYAD TALKIEMVGD STIMGKNLAN IASIGIYTGS TLNLSGSGSL YVSGGTGKFS 
VGIYSGGSIT IEGGRVTAVG AAATQTSIGI ASNGNITIHD GEVEALANTG ASISWGMMAT 
NAITINDGEV TASGKTGLHT NAAAGSVTIS DGMVTANGSE VGIAGAVTVT GGTVTVKSDA 
KALNGSLTTS GYEGCIVTAG ANKNGDGAGT YNAANLATYK YIKVESASTP PVLTEVGDRT 
ALQSAITGAT VDLDLKLSDS YIDTVGKLTI PGTCSYNITI DLNGRTLAGA SVSAIEYLGS 
GTLTITDSAG GGMVTSNAMG TIYANGAGTV NLSGGTVRTA GSTESVAIWV GGNKTLNITS 
GTVIGIGYAN YAIYSKNGTV NISGGTVSAT GINGKAICGE TGSAGQLNIS GGTVSATWTG 
GIAIDHQNTT IQTGTTNIII QGSSRAMTSP PTLVGGVQDG ASTNYDGSGS VAYNAANIAT 
YKYLKFGLDV ISPVLSSGSV NRTSDTAATI DFTTDKAGTA YYLVVNSGVS APTSMAVKAG 
TSLDSVSGTV TDKAATLTAG AKDIYVVVED SAGNISTPLK ISVAAYVAPD TTAPTVTSVT 
VPTNGTYLPG TYLDFTVNFS ESVAVTGSPY ISLTIGSNSR NAIYQSGSGT TALVFRYTVQ 
ADDSDSDGIT VGVSLNASGG TIRDAAGNNA NLALNSVGST GGVLVNPPAP SITSQPSPQT 
VDEGQTATFS VTATGVGLSY RWQVNTGSGV SNISNGGVYS GAGTSTLTIT GATAGMNGYQ 
YRAVVEGTYL PAATSNWATL TVNAAPTYTI TASPTSKDFG SLTIGYTAPA AQTVTITNTG 
NSSVTLTQPT STNYTIGALS TTTLAANGTA TFTITPKTGL AIGNHDETLT VSTDHGTNAT 
VGLSFEVTTA PTYTIIADPV TKDFGSLTIG YSAPAAQTVT ITNTGNSSVM LTQPTSTNYT 
IGALSTTTLA ANGTATFTIT PKTGLAIGNH DETLTVSTDH GTNATVGLSF EVTTAPTYTI 
TADPVTKDFG SLTIGYSAPA AQTVTITNTG NSSVMLTQPT STNYTIGTLS TTTLAANGTA 
TFTVAPKAGL AVGNYNETLT VSTDHGTNAT VELSFEVTAV PYTVTFNPNG GTVSEASRSV 
ASGTAVGALP TPTRSGSYSF DGWYTAASGG TQISASTTVS ANVTYYAHWT YTGGGGSGSG 
GGSSSNDNSS PVIVTPPAPD KPNSPTQGEI KVPGTVDGKG NVTVSIIDKT VTDAFNKALA 
EAKKNGTEQN GITVVLRVDT GNKTGSNVTV NLPKAVQDTI IAKKIVNTIV VVDNPDIRVG 
MDLATVQEIN KQAKSDVNIT ATRTNSGKLT GEAKKAIGSR PVFDLKVNYG NGKAVSSFGA 
GSVSVTIPYT LGANEKAGNV QAVYVDSKGK VHWLVNSVYD SVEKVLRFST DHFSIYGIGY 
KQANTAFTDI AGHWAKEDIE FVASRGLFGG TSETKFSPNT AMTRGMFVTA LGRLANADVS 
GYAKSSFSDV QDDAYYMGYI EWASKNNIVN GVGNGKFAPD QSITREQMAV IMSNYAKTIG 
YTLPKVHIEN IFTDNAKIST YAKEAVKQMQ MAGVISGKNG NLYDPQGTAT RAEVSAVLRR 
FVELAISSDT AQGWSMNDSG KWMYFKDGKP LTGKQDIDGA TYTFDQYGVT ADVPKNLRYT 
TYTVQKGDSF WSISRKLGCP MSELERLNNK SRFSLILPGE VLRVPEK