Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2427 |
Symbol | |
ID | 7259398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 2618559 |
End bp | 2620406 |
Gene Length | 1848 bp |
Protein Length | 615 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643562313 |
Product | hypothetical protein |
Protein accession | YP_002458891 |
Protein GI | 219668456 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAGC AATTTATGGG CATACTGCTC ACTCTGTGTA TGGCGCTTAC CTTACTGCCG ACAACGGCGT TTGCGGCGGA TGCATCAAGT CAGAATCTAT ACCAGGTCGG TTCAAACCCG GTATACAGAT TAAGCCCGAA CGGTGAGATT ATCGGGGAGT TCCCGTCCGG CACAATTGTG GAAGTGATCG AGATAAAAGG CGACTGGGCA AGGGTGCGGT ATGAAGGGCA AGAGTATTAT ATGTGGGCGC CCAGGCTCAC CAAAGTCGGC GCAGGCACAA CCAGCTCCAA CCTTGCGGAA AAGCCCTTCG CACCGCCGGA CGGCTGGTAC ACCATCGAAA CCCCGAACCC TAACGGCAAA TCCACCAGCG GGCATATTAT CATCGGCAAC GGCGGTGCGG TGGTAGACTT GGCAAGCGCC GGATTTGAGT ATTATTGGCA GCGCTATATC TATGTTGACA ACATCGGCAA CGACCAAGTG ACGCTGAAAA CACTGGATGG CAAATATCTG GGGATCAGCG ACCCAATCAA AGACGGCACA AGGGTAAGGG CGGTGGACAG CCCTTATGTG TGGAACGCCT ACACCACAAC AAAGCTTGAG AGCGCGCAAG CCAATCCCTC GTCGGCTTTT ATTAGTTTCA GGCCGCCGCA GAACACCAAT ATGATTGTCA ACGTCTCCGG ATGGAAATTA AATGAGGAGG GTGCGCACAT CATCCTGTGG TCAAGCAAGC TTGGCACGGT TGACGGCAAC GCCAAGCTCT CTTGGGGCGA GGTCGAAGAC CCGGCGAAAA CCCTCACAAT GCGGGATTTG GTCGAAATAC TCAACACTCA TGTTATGGAA AGGCTGTATG GCGATTTTTC CCTCAGCCCT TCTCAGGGCA TTTTCCCGCC CGCTTCTGAC ACGCCATACA AAAACTACTA TTGGGACGGC AGCGGCCCTG ACCCCTACGA GGGGCTGAAG GATGCTGCCG GCAATCTCAA CTACGACTAT GCCGATGTTC CCAACTGGGT CGGCAGGCTT CGCATGTGGG GCGTCCTTCC CGGCGGAGAT TACAACGGCA CCACCGAGAT TACCTATGGC CAGTTCACCG GCTATCTGAA AAAGCTGATG GCTTACGGCA GGCAAAACGC AATAAATTGG GGCAAGGTGG AGAAGTTCTA TAATCCACGA GAGACATTCA CGGATGACAT CATCAAGAAA TTCGGCTTCG GCGACAGCAG GGCGGAAAGC AAAATTACAT TTTTGCAGGC AATGCTTATC TGCGACGCCA CAGTGCAGTG GTGGTACGCC AGTGCGGAGG TAGACGGCAA TGACGCATAT GTACCCTATA AAAAGGGGGA TTTGCCCTTC CCCTATAAGT ATGCGTCTAT TGTGAACCAA TCGTCGCAAG CCGCGACACC GGCACCGGCG CCGACACCCA CCAACACCGT TACGGCAACG CCCACCAACA CCAAGTTTAT GTTAAACGGT GCGGAAGTCG CGCTGCCCGC TTACAGCATC AGCGGCAACA ACTACGTCAA ACTGCGGGAT GTGGGCGCGT TGCTGAAAAC ACGCTTTGAT GTGCGTTTTG AGGATGGCAA GGCAAAGCTG TATAACCATG CGGCGTACAC CAAAACGAGC GGCGAGCTTG CCGCAATCGG CAAAGACAGT AAAAATGCTA CACTGAGTTC CACAGCCTTT GTATGGGGTG ACACCGGTGC GGCGGTGACG GGACTGACCG CCTATACCAT CGGCGGCAAC AACTATATCA AGCTGCGGGA CATCGCAAAG CTGTTTGACT TCGATGTGGA CTGGCGCGAC GGCAAAGCGT GGATCGAGCC TGACGTGTCG CCGTACACGG AGGACTAA
|
Protein sequence | MKKQFMGILL TLCMALTLLP TTAFAADASS QNLYQVGSNP VYRLSPNGEI IGEFPSGTIV EVIEIKGDWA RVRYEGQEYY MWAPRLTKVG AGTTSSNLAE KPFAPPDGWY TIETPNPNGK STSGHIIIGN GGAVVDLASA GFEYYWQRYI YVDNIGNDQV TLKTLDGKYL GISDPIKDGT RVRAVDSPYV WNAYTTTKLE SAQANPSSAF ISFRPPQNTN MIVNVSGWKL NEEGAHIILW SSKLGTVDGN AKLSWGEVED PAKTLTMRDL VEILNTHVME RLYGDFSLSP SQGIFPPASD TPYKNYYWDG SGPDPYEGLK DAAGNLNYDY ADVPNWVGRL RMWGVLPGGD YNGTTEITYG QFTGYLKKLM AYGRQNAINW GKVEKFYNPR ETFTDDIIKK FGFGDSRAES KITFLQAMLI CDATVQWWYA SAEVDGNDAY VPYKKGDLPF PYKYASIVNQ SSQAATPAPA PTPTNTVTAT PTNTKFMLNG AEVALPAYSI SGNNYVKLRD VGALLKTRFD VRFEDGKAKL YNHAAYTKTS GELAAIGKDS KNATLSSTAF VWGDTGAAVT GLTAYTIGGN NYIKLRDIAK LFDFDVDWRD GKAWIEPDVS PYTED
|
| |