| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2410 |
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| Symbol | |
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| ID | 7259380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 2601250 |
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| End bp | 2604822 |
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| Gene Length | 3573 bp |
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| Protein Length | 1190 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643562295 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_002458874 |
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| Protein GI | 219668439 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00080646 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGATTTG TTCACCTCCA TGTCCATACG GAATACAGCC TTCTTGATGG GGCGGCCCGG
ATTGAGAAAC TGGTGAAAAA AGCCGTCGAG CTGGGTATGC CCTCGGTGGC CATTACCGAT
CACGGTGTCA TGTATGGTAT TATTGATTTT TATAAAGCCT GCAAAAAGGC CGGCATTAAG
CCCATTATTG GCTGTGAAGT TTATGTGGCC CCGCACCGGC GGACGGAGAA GGTGCCGGGA
CGGGATGACA ACAACCGCCA TCTTGTGCTG CTGGCTGAAA ATGAAGAAGG GTACAAAAAC
CTCATTAAAC TTGTCTCCAT GGCTCATATC GAGGGCTTTT ATTATAAACC CCGGGTGGAC
AAGGATATCC TGAGAAGGCA CAGCCGGGGA CTGATTGCCT TAAGTGCCTG CTTAGCGGGA
GAAGTCTCGG AGTATCTCCT CAATAATCAG CTGGAGACAG CGGTAGAGAG TGCGTTGGAG
TATGAAGAGA TCTTCGGCAA AGGGAATTTC TTTTTGGAAG TCCAGGACCA TGGCCTGGAG
GAGCAGCAGC GGGTTAATAC GGGAATGTTT GAGGTGCAGC GCCGAACAGG GATTCCCATG
GTAGCCACCA ACGATGTCCA TTACGTCAAC AAAGAGGATG CCTTTATCCA GGATGTGCTC
ATCTGCATTC AGACTGGAAA GAACCTTACC GATGCCAGCC GTATGAGCTT TTCCAGCGAG
GAGTTTTTCT TGAAATCGGA AGCGGAGATG AATCTGCTGT TTGGCGAGCA TCCGGAGATT
CTGGAGAACA CGGCCCGGAT CGCGGAGCGC TGTCAGGTAG ACTTTAAATT CGGGGACAAT
TATTTGCCGG TCTTTGAGGT TCCGGAAGGC TATACCCTGG ATACCTATCT GAGAAAAAAA
TGCTATGAAG CTTTTCCGCT TTTTTACCCC AACCAAAGGA CCGAAGAAAA AGAGCGGCTG
GATTATGAAT TAGGAGTCAT CGCCCAAACC GGGTTCTCCG GCTATTTTCT GATCGTGGCG
GACTTTTGTC AGTATGCCCG TCAAAATGGT ATTGCCGTGG GGCCGGGCAG GGGATCTGCC
GCCGCCAGTA TGGTAGCTTA TCTGATGGGG ATTACCACTG TAGAACCGAT GCAGCACGAT
CTGCTTTTTG AGCGGTTTTT AAATCCGGAG CGGATCAGCA TGCCGGATAT TGATATAGAC
TTTGACCCGG ACGGCCGGGA GCGGGTGATC AACTATGTTA TGGAAAAATA CGGCGCCGAT
AAGGTCTGTC AGATCATTAC CTTTGGAACC ATGGGCGCCA AAGCGGCCAT TCGTGATGTG
GGCAGAGTGC TGGGAATTCC TCTGGCCCGG GTGGATAAAG TGGCCAAAGC GATCCCCAGT
GACTTAGGTA TGACCTTGGA GAAAGCCCTG GCTGTATCCC CCGATTTGGT GAAGCTCCTG
GAAGAGGACG GGGAGATTAA GAAGCTCTAT GAAATCGCCC GCTCCCTCGA AGGAATGCCT
CGTCATGCTT CCACCCATGC CGCCGGTGTG GTGATCGCCA AGGATGCTCT GGATACCTAT
ATCCCCTTGC AAAGGACTTC CGACGGAGGC TTCACCATGA CCCAATTCCC CATGAAGACG
GTGGAAGAAG TGGGCCTCCT TAAAATGGAC TTCCTGGGGC TGCGCAACCT GACCATCATC
CAGGAAACCT TAAAGCAAAT TGAGGGGAAT CGGGGGGAAG TGCTGGATCT GCAAAGCCTG
CCCCTGGATG ACAAGGCCAC TTTTGACATG CTTTCCCTGG GCAACAGCAC CGGTGTTTTC
CAACTGGAAA GCGGGGGGAT GCGCAATGTA CTTAAAGAAT TGAAACCATC CTGTTTTGAA
GATATTATCG CGGTGGTCGC CCTGTTCCGT CCCGGCCCCA TGGAGCAGAT TCCAGAGTTT
ATCCGCCGCA AGCATGGGGG AAACGTCTCT TACCTGCATC CCCTGCTGGA GCCCATTCTC
AGAAGCACCT ATGGGGTGAT CGTCTACCAG GAGCAGGTCA TGCAGATTGC CCGGGATTTA
GCAGGTTATT CCCTGGGACG CGCCGATCTG TTGAGGCGGG CTATGGGGAA AAAGAAAAAG
GAGATCATGG AAGAAGAGCG GCAAAGCTTT ATCTATGGTT TGCAGAGCCC CAGCGGCGAG
GAGATTATTC CCGGTGCCCT AAAACTCGGC CTCACGGAAA AGGAAGCTGC GGAAATCTTT
GACTTGATGG CCAAGTTTGC CGAATATGGC TTTAATAAAG GGCATGCCAC AGCCTATGCC
GTGATTTCTT ATCAGACAGC TTACCTTAAA GCCAACTATC CGCTGGAGTT TAATGCGGCT
TTAATCAGCA CCGTGATGAG CTCGGCGGAT AAGGTGTCCT TTTATATTCA TGAAGCCCGG
CAAAGCGGGA TTGAAATTCT CCCTCCGGAT GTTCAGTACA GTCAGGTGGG CTTCAGCATT
GAAGGCCGGG GCATTCGCTT TGGCTTAGGG GCTATCCGCA ATGTGGGGGT CAATGTGGTG
GAGAAAATCA TTGAGGCCCG TCAGGAAGGC CTTTTTGACT CCCTCTATGA TTTCTGCATT
CGTGTGGATG CCAAGGTCCT CAATAAGCGG GTCCTGGAAA GCCTCCTCAA AGCCGGAGCT
TTCAGCTTGC TGTGTAAAAG GGCCCAAGGA CTCTTAGCCT TGGATTCTAT CCTGGAGATA
GCCCAGCAGC GCCAAAGGGA TAAAGAGAGC GGACAAATTT CCCTGTTCGA TTTTGGGGAC
GACTTGGATG AAGGGATTGA ACTCCCTGAT GTCGAAGAAT ATTCTCCTCG AGAACTCCTG
ACGATGGAAA AGGAATATCT GGGTCTTTAT CTCAGCGGCC ATCCTCTGGA AAGTGTTCTT
CCCAAGCTAA AGAATGCTGT CTCTGAGGAT ATTCTGACCT GTCTCGAAGG CGATGAGGAA
AAGAAGGTCA TCCTGGGGGG AATCGTCACC GGATACCGCA CCACCGTGAC CAAACGGGGG
GAAATGATGG CCAGCTTTGT GCTGGAGGAT TTAACCGGAA CTATAGATGT TTTGGTGTTC
CCGCGGATTT TTGCCCAAAG TGCCCGTTTG ACGGAGGATC AGGTCGTGGT GGTGGAAGGA
AGATACAACA TCCGGGATGA TGAACGCAAG ATTTTTGCGG AGCGTATCAC GGATCTGGAG
AATGGGGCAG AGCGAACTAA ACCGATAGGG TACAAGGACT ACGAGAAAAC TCAGACCCGG
GAGAAAGCTC AGACTCGAAC CCAGCCGCCA ACTCAGCCCT CAACCCAGTC TCCCCCGAAG
CTTAGTGCAG TACCTTCCGC GAAGCCCGGT GCAGTACCTG CCCGGAAGCT TTACTTAAGA
TTTCCTTACG AAGGGACGCC TCTTCTCGAA GAGGCCCTGC CGATCCTGCG TCATTATTCG
GGAACCCATC CGGTGCTCTT CTATTTTGAG CAGGATAAAA AACTGATTCA AGGAAACCGG
GAACTTTGGG TGAATGATTT GGAGGAATTG GTTCAGGCCT TGTCAAACAT ACTAGGGGAA
AGCAATGTGG TATGGAAGGT CAATGCCATG TAA
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| Protein sequence | MGFVHLHVHT EYSLLDGAAR IEKLVKKAVE LGMPSVAITD HGVMYGIIDF YKACKKAGIK
PIIGCEVYVA PHRRTEKVPG RDDNNRHLVL LAENEEGYKN LIKLVSMAHI EGFYYKPRVD
KDILRRHSRG LIALSACLAG EVSEYLLNNQ LETAVESALE YEEIFGKGNF FLEVQDHGLE
EQQRVNTGMF EVQRRTGIPM VATNDVHYVN KEDAFIQDVL ICIQTGKNLT DASRMSFSSE
EFFLKSEAEM NLLFGEHPEI LENTARIAER CQVDFKFGDN YLPVFEVPEG YTLDTYLRKK
CYEAFPLFYP NQRTEEKERL DYELGVIAQT GFSGYFLIVA DFCQYARQNG IAVGPGRGSA
AASMVAYLMG ITTVEPMQHD LLFERFLNPE RISMPDIDID FDPDGRERVI NYVMEKYGAD
KVCQIITFGT MGAKAAIRDV GRVLGIPLAR VDKVAKAIPS DLGMTLEKAL AVSPDLVKLL
EEDGEIKKLY EIARSLEGMP RHASTHAAGV VIAKDALDTY IPLQRTSDGG FTMTQFPMKT
VEEVGLLKMD FLGLRNLTII QETLKQIEGN RGEVLDLQSL PLDDKATFDM LSLGNSTGVF
QLESGGMRNV LKELKPSCFE DIIAVVALFR PGPMEQIPEF IRRKHGGNVS YLHPLLEPIL
RSTYGVIVYQ EQVMQIARDL AGYSLGRADL LRRAMGKKKK EIMEEERQSF IYGLQSPSGE
EIIPGALKLG LTEKEAAEIF DLMAKFAEYG FNKGHATAYA VISYQTAYLK ANYPLEFNAA
LISTVMSSAD KVSFYIHEAR QSGIEILPPD VQYSQVGFSI EGRGIRFGLG AIRNVGVNVV
EKIIEARQEG LFDSLYDFCI RVDAKVLNKR VLESLLKAGA FSLLCKRAQG LLALDSILEI
AQQRQRDKES GQISLFDFGD DLDEGIELPD VEEYSPRELL TMEKEYLGLY LSGHPLESVL
PKLKNAVSED ILTCLEGDEE KKVILGGIVT GYRTTVTKRG EMMASFVLED LTGTIDVLVF
PRIFAQSARL TEDQVVVVEG RYNIRDDERK IFAERITDLE NGAERTKPIG YKDYEKTQTR
EKAQTRTQPP TQPSTQSPPK LSAVPSAKPG AVPARKLYLR FPYEGTPLLE EALPILRHYS
GTHPVLFYFE QDKKLIQGNR ELWVNDLEEL VQALSNILGE SNVVWKVNAM
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