Gene Dhaf_2389 details

Gene Information

• Locus tag: Dhaf_2389
• Symbol: mscL
• ID: 7259358
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfitobacterium hafniense DCB-2
• Kingdom: Bacteria
• Replicon accession: NC_011830
• Strand: +
• Start bp: 2581644
• End bp: 2582096
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 643562274
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_002458854
• Protein GI: 219668419
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 0.000367491
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGGAAAG AGTTTAAAGA ATTTGCCATG AAAGGGAATG TCATTGATCT GGCTGTGGGC 
GTTATTATCG GAGGCGCTTT CGGCAAAATC GTCACTTCCT TGGTCAATGA TGTGATTATG 
CCTTTGGTAG GGCTTCTCCT GGGTCAGATG GATTTTTCCA ATGCCTTTAT TACTCTGGGA 
AAGGGAGATT TTGCTACCAT TGCCGAGGCT CAGGCGGCCA AGGTCCCTAC CTTGAATTAT 
GGATTATTCA TTAATAATGT CGTGGATTTT CTGATCATCG CCTTTACTAT TTTCATTGTA 
ATCAAGCAGA TCAACCGGTT TAACAGAAAG AAGGAAGTTA AGGAAGAGGT GGCAGAGGAA 
AAGGCTACCA AGCCCTGTCC TTATTGCTAT GTGGAAATCC ATAAGGAGGC GACACGGTGC 
CCTCATTGTA CTTCGGTTTT GGAGAGCCCT TGA 

 

Protein sequence

MWKEFKEFAM KGNVIDLAVG VIIGGAFGKI VTSLVNDVIM PLVGLLLGQM DFSNAFITLG 
KGDFATIAEA QAAKVPTLNY GLFINNVVDF LIIAFTIFIV IKQINRFNRK KEVKEEVAEE 
KATKPCPYCY VEIHKEATRC PHCTSVLESP