| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2388 |
|---|
| Symbol | |
|---|
| ID | 7259357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2580005 |
|---|
| End bp | 2581630 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643562273 |
|---|
| Product | aminotransferase class V |
|---|
| Protein accession | YP_002458853 |
|---|
| Protein GI | 219668418 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000000269735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGTA CGGATTTAAG CTTTAAAATT GCCGCTGCTG AAGAGGAGTT TGAACAAATC
CACCGCTTAA ACTACAAAAC CTTTGTCAAA GAAATTCCTC AACATGAAGT GAACAGCCAG
GAACGGCTGG TTGATCCATT CCACCAGGAA AATACCTATT GCATCGCTTT GCACCGGGGA
AAACTCATGG GGATGTTGGC CTGCCGGGAC AAACGGCCTT TTTCCATCGA TCGGAAATTG
GCGGATTTAG ATTCCTATCT GCCTCCTTAT AGCTCAATCT GCGAAATTCG TCTCTTGGCC
GTGGAGAAGG AGGTGCGGGG GACGCGGGTG CTGCTGGGGC TGATGAGCCT GCTTTTTGAG
CATTGTCAGA AAAAAGGTTA TGATCTGGCC GTAATCTCTG GTACAGTAAG GCAGCTGAAA
TTATATAATC ACCTGGGCTT TAAGCCTTTT GGTCCTCTGG TAGGGACAGC GGCGGCTTCT
TATCAGCCCA TGTACATGAC ACGGGAGCAG ATGAGTCAAA AGCTTATCGA ATTGTTTAAG
GCTTTCCAAA GCAAGGATGG CCGGAGAGAT AGTGTGAATT TTCTTCCCGG GCCGGTCAAA
CTTCGCCGGG AAGTGCAAGA GGCCTTAGGG AGACCTCCCC GTTCTCACCG GTCGGAGGAA
TTCCTGGCAG TAATGGCCCG AATCAAAGAG CAACTGGCCC AATGGCTGAA GGTTCACTAT
GTTCAGATCC TGCTGGGATC AGGGACTTTG GCCAATGATG TGGTGGGGGC TTATCTCCGC
ACGGCTCTGG GGCAGAAAAA AGGCCTGGTT CTCAGCAACG GTGAGTTCGG GAACCGTTTG
CTGGATCAGG CGCGACGGGC AGGTCTCAAT TTTGAAGACT ATAGTATTCC TTGGGGAAAA
GGGTTCGATT ATGAAGACAT TGAAAAACAC CTGAGCAAGG GGGAGGGTTC GATTCAGTGG
CTCTGGGCGG TCCATTTGGA AACCTCCACC GGAGTGCTCA ATGATTTGCC AAGACTGAAG
GCCCTCTGTC ACCGCCAGCG CATTCCTCTG GCTGTGGATT GCGTGAGTTC CATCGGTGCG
GTACCAGTGG ACTTAAGTGG GGTCTATTTA GCCACCGGAG TCAGCGGCAA AGCCCTCTGT
TCCTATCCCG GGCTGAGTTT CGTCTTTTAT AATCAGGCCC TGGAGGGCGG AAGACTGCCC
CGCTATATGG ATCTGGGATT ATATCAACAG TCGGAGGGGG TTCCTTTTAC CCAATCCTCC
AATCTCATCT ATGCCTTGGA GCAGGCTTTG CACTATGCGG CAGAAAGAGA GCTGTGCATT
AACCAAAGAC AGGGGGAGTG GCTCAGAGCG AAGCTGCAGG AGCTTGGATT TCAAGTATTA
GCCTTACCGG AAGACGCCGC CCCCAATATA CTTACTCTGG TACTGCCCCG GGAAGTGCCA
TCCCTGGAGT GCGGTGAGCT ATTGGAGGAA GAGGGCTATG TTCTCAGCTA TCGCAGCGCC
TATCTTTTTC AGCGCAACTG GGTCCAAATC TGCTTAATGG GGGAATATGA ACCTGAGCAA
ATTTACGCCT TTCCGGAAAT GCTGGCAGAA TGTATGAAGA AATGTGGATT AAGAAAAGGT
AAGTAA
|
|---|
| Protein sequence | MASTDLSFKI AAAEEEFEQI HRLNYKTFVK EIPQHEVNSQ ERLVDPFHQE NTYCIALHRG
KLMGMLACRD KRPFSIDRKL ADLDSYLPPY SSICEIRLLA VEKEVRGTRV LLGLMSLLFE
HCQKKGYDLA VISGTVRQLK LYNHLGFKPF GPLVGTAAAS YQPMYMTREQ MSQKLIELFK
AFQSKDGRRD SVNFLPGPVK LRREVQEALG RPPRSHRSEE FLAVMARIKE QLAQWLKVHY
VQILLGSGTL ANDVVGAYLR TALGQKKGLV LSNGEFGNRL LDQARRAGLN FEDYSIPWGK
GFDYEDIEKH LSKGEGSIQW LWAVHLETST GVLNDLPRLK ALCHRQRIPL AVDCVSSIGA
VPVDLSGVYL ATGVSGKALC SYPGLSFVFY NQALEGGRLP RYMDLGLYQQ SEGVPFTQSS
NLIYALEQAL HYAAERELCI NQRQGEWLRA KLQELGFQVL ALPEDAAPNI LTLVLPREVP
SLECGELLEE EGYVLSYRSA YLFQRNWVQI CLMGEYEPEQ IYAFPEMLAE CMKKCGLRKG
K
|
|---|
| |