| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2347 |
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| Symbol | |
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| ID | 7259316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 2536733 |
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| End bp | 2537959 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643562234 |
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| Product | transcriptional regulator, CdaR |
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| Protein accession | YP_002458814 |
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| Protein GI | 219668379 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3835] Sugar diacid utilization regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.00870953 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAACG TCAGTTCAAT GCCGAATTAC ATGCGGAAGC TTCTTAAAAC ATCCGGCCAA
GGGCTGGATG CTCTTACTTG CGCCATTGCC GAGGTGTTGA ATCAACCTAT CCTGGTTTCT
ACTCCGACTT ATGAGACCCT ATCCACAACA CTTCTTCACC CGGATCTGGA CTCCTTTCAG
ATGGTGATAG AAGGGGAGCG GGGGGATAAC GAGACCTTAT TTTTTTGCAC CCTATCCACT
GAAGCGTTGC ATCTGAAAGG GGCAGGCTGG GCCATCGCCC CCAATGGCCG GATATTGGGG
TATCTTTTTG TGCTGTATGA TGAAGTCAAG CCGGACTTTG AGGAGTTTCA AGCCATTATA
GAAACGGCCC TCTCTCTATA CTCCATCCAC CTTCAGAATA AGTTGGAGCT GAAGCAGGAA
AAACATAAAA CAAAAAATGC TTTCTTTTAC GATTTACTCT ATGGCAACCT TAAATGCAAC
GAAGATATTA TGACGATGGG AGAAGTATGG GGCTGGGACT TCCACCGACC CCATACGGTG
TTGCTTTTAC GGGTCCCTGA TCTGGAGTCT CATTCCCCTG ACTGGCACCT TATGGAGGTG
CTGCAAAAGA CTGTGGATCG AACCTTGATC AATAGATACT ATAAAAATCC GGCAACGACA
GTGAATCGAA ACGAAGTCGT GGTCATTCTG CCGGCGGAGA GTGAAAAGGC GGCTGAGCGG
AAACCGGAAA TCACTTCCTT AATAGAGGGC CTTTCCAATC AGTTTAAGAC CACAGTGTCC
GATTACCGGA TCATCTGCGG AGTAGGGAAA ACCTACGCCC AGCCCAATGA CCTCTTTCGC
AGTTACCAGG AGGCCAAAGT CGCTTGTGAG ATGGGAAGCC TGCTGGAAGT TGAGGTACCA
TTTTTCAGCG ATATGGGTCT GGAAAGAATC CTGTACAAAC ATGACCTGGA AGATCTGAAA
GAATACTATC ATCATGTTCT GGGAGATTTG CCTGAAGAGG ATGAGGGTGA GGATAATCTG
GTTTGGCTAT TGGAGAGTCT CGTGGATAAC CAATTTGATA TGAATAAAAC AGCTCAGGCC
ACTTTTTTAC ATCGCAACAC CCTTCGTTAC CGTTTAAATA AAATTGAGGG AATCCTCGGA
CGTTCCTTAG CAGATATTAA TACACGCCTG GATCTGGCTG CGGCTTTTAA AATCCGGCGG
CTGCACAAGA TTCACCTGCT GTCCTGA
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| Protein sequence | MGNVSSMPNY MRKLLKTSGQ GLDALTCAIA EVLNQPILVS TPTYETLSTT LLHPDLDSFQ
MVIEGERGDN ETLFFCTLST EALHLKGAGW AIAPNGRILG YLFVLYDEVK PDFEEFQAII
ETALSLYSIH LQNKLELKQE KHKTKNAFFY DLLYGNLKCN EDIMTMGEVW GWDFHRPHTV
LLLRVPDLES HSPDWHLMEV LQKTVDRTLI NRYYKNPATT VNRNEVVVIL PAESEKAAER
KPEITSLIEG LSNQFKTTVS DYRIICGVGK TYAQPNDLFR SYQEAKVACE MGSLLEVEVP
FFSDMGLERI LYKHDLEDLK EYYHHVLGDL PEEDEGEDNL VWLLESLVDN QFDMNKTAQA
TFLHRNTLRY RLNKIEGILG RSLADINTRL DLAAAFKIRR LHKIHLLS
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