| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2324 |
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| Symbol | |
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| ID | 7259293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 2510503 |
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| End bp | 2512119 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643562211 |
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| Product | cell wall hydrolase/autolysin |
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| Protein accession | YP_002458791 |
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| Protein GI | 219668356 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase
[COG2247] Putative cell wall-binding domain |
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| TIGRFAM ID | [TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000122542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTGGA AACGGATTTC TTTTTTGTCT TTAACAGTAA TTCTCCTTTT GAATCTTTTT
CCCTTCACAG TTTTTGGTGC CGAAGCAACT GCAGAATCCT CTGCAACCGG AGCCGCTACG
ATAAGATTAT ATGGTAAAGA CCGCACAGCC ACTTCTATCG CCGCATCCCA GCAAGGGTGG
ACGACCTCGG AAACCGTCAT TCTCAATGAA TTGAATAATT ATGCCGATGC TATCGCCGCT
ACTCCCCTGG CGGTTGGGCT GGATGCGCCG GTTCTTCTGA CCTATGGCGC TCATCTTGAT
CCCCGGGTCA AAGAGGAATT AAAGCGCCTG GAGGCCAAAA AGGTGATTCT GCTGGGCGGC
AATGGGCGGC TATCCACTTA TCTGGAAAAA GAACTCACTG AACTCAATTA TCAGTGGGAA
AGAATTGGCG GACAGGATCG CTATGAGACA TCAACCCTCA TCGCGGCAAA GGTTCCCAGT
GATACCATGA TTCTGGTCAA CGGAGACGAC TTCCCGGACG CTCTTTCCGC GGCGTCCTAT
GCCGGAAGCC AACAGATCCC TATTCTTTTG ATGTCAAACC CTGAGTTTCC CCAAAGCGTA
TCCGACTATT ATCAGCAGCA TAGACCCTCC CAGGTCATTG TGGTGGGGGG AGATGGCGTG
GTTCCTGATC AACTGCTTGA GGAACAGAAT ATCCCTGTAA GTCAGCGTTT GGGAGGGCAG
GACCGCTACG AATCAGCGGC TAAGCTCTAT GAGTATGCTC AAACTCAAAA CGTCTATGAT
GCAAAGCAGC TTTATCTGGC TTCAGGTCAG CACTATCCCG ACGCCATGGT AGGAACCGTT
CTTGCTGCCA AGAATAACTC GGCCCTGCTG ATTACGAAAA GTTATACTTT GCCTGAGTCC
ATCGCTCCGA TTTTTAGCCC GGATAAGCTT GCCGCTATGG AGGTCTTTAT TCTGGGTGGC
ACAGGTGTGG TTTCGGGGAA AATTCAGGCT GAACTGGAAG GCAAAGATTT TATTAAGAAC
CTGCTGATTG GCAAAACTGT GGTTGTGGAT CCCGGTCATG GGTCTCCGGA CCCGGGAGCC
ATCGGACCCG GCGGCTCCAA AGAGAAGGAT AATAATTTGG CTATTGCCCG GTATCTGGCC
GTGGAGCTGG AAGCGGCCGG AGCCAAGGTG GTCTTGACCC GCAACGATGA CAACTCTCCG
GCTTATGCTC CGGGAACACC CTACACGCAA AGAGGGGACC TGCAAAAACG TGTGGATATC
GCCAATGAAA ACAATGCGGA TCTCTTCATC AGTATTCATA ATGACTCCTG GCAAACGGCT
CAGGGCACGA CGACCTTCTA CTCCTCGGAA AACCCCAGTG GTTCTCCCAG CTACAAACTG
GCCCAATATA TTCAAAGCGG GTTAACCCAG GAGATTGGCA CCAAAAATCT TGGTGTTAAG
GATTCGCGGC TTTATGTGCT GAGGAACAAT ACCATGCCGG CAGTTCTGGT GGAAGTAGCT
TTTATCTCTC ACCCAACCGA GGAGAAACAG CTCAGTGACA ACGCTTTTAG AGAGAAAGCC
GCACAGGGAA TAAGTCAAGG AGTTCAAGCC TATATCCGTT ACCTTGAAAG AGTTTAA
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| Protein sequence | MQWKRISFLS LTVILLLNLF PFTVFGAEAT AESSATGAAT IRLYGKDRTA TSIAASQQGW
TTSETVILNE LNNYADAIAA TPLAVGLDAP VLLTYGAHLD PRVKEELKRL EAKKVILLGG
NGRLSTYLEK ELTELNYQWE RIGGQDRYET STLIAAKVPS DTMILVNGDD FPDALSAASY
AGSQQIPILL MSNPEFPQSV SDYYQQHRPS QVIVVGGDGV VPDQLLEEQN IPVSQRLGGQ
DRYESAAKLY EYAQTQNVYD AKQLYLASGQ HYPDAMVGTV LAAKNNSALL ITKSYTLPES
IAPIFSPDKL AAMEVFILGG TGVVSGKIQA ELEGKDFIKN LLIGKTVVVD PGHGSPDPGA
IGPGGSKEKD NNLAIARYLA VELEAAGAKV VLTRNDDNSP AYAPGTPYTQ RGDLQKRVDI
ANENNADLFI SIHNDSWQTA QGTTTFYSSE NPSGSPSYKL AQYIQSGLTQ EIGTKNLGVK
DSRLYVLRNN TMPAVLVEVA FISHPTEEKQ LSDNAFREKA AQGISQGVQA YIRYLERV
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