| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2280 |
|---|
| Symbol | |
|---|
| ID | 7259249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfitobacterium hafniense DCB-2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011830 |
|---|
| Strand | + |
|---|
| Start bp | 2463560 |
|---|
| End bp | 2464735 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643562167 |
|---|
| Product | germination protein, Ger(x)C family |
|---|
| Protein accession | YP_002458747 |
|---|
| Protein GI | 219668312 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02887] germination protein, Ger(x)C family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0000000254278 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAAGA AGGCTCATGG TTTATTAGTG ATCAGCCTGT TGGCAAGCGT CCTCCTGATG
AACGGATGTT GGGACAGCAG GGAAGTGGAG GACTTAGCTG TATCAACTCT TGTTGCCTGG
GATCGAGTTA CCGTCGAGGG GAAGGATCTA TGGCAGATTT CCACCCGCAT CCTGGATTTG
AGAGTACCTC AGGGCAGTGG GGGAAAAAAA GATTCAAGTG CGCGGGAGCT CCTGCTGAAA
GGGACCGGAA TTACGATCCA AGATGCTTTT AATAATCTGG TCAAGCGCTT GCCGGCTACG
GATTTTGTTG AGCATAATGT GGCGATTATT ATTGGGGAAA GAGTGGCCCG GGAAGAACTT
CCCAATATCA TGAGTGCGGA CCTGCGCTTG CCCTTCTCCC GTATCAGTGT TGATATGTTT
GTTTGTGAAG GGGAGGCTTA TAAAATATTG CAGGCAGAAC CGGAATTGAG TTCAACTTTG
TCAAAAGAGG TGCGCAAGAT TGCTGATAAA ACCATGGAAG AAAGCGGAGC TGCTCTTAAA
ATGACCGCAT TGGATTTCAG TAAGCAGCTT ATTCGCAAGG ACCGGGATAC AGTATTGCCC
CGCATCAGAA TTTATTCCAA GCAGGAGGGA GAGGAAAGCG TCGAAACCTC TGTAGAGATT
CAGGGATTTG GAGTGATTCG TGACTCAGAG CTGGTTGGGT GGCTGGAGGA CGAAGAAGCT
TTAGGGTATG TTCTCAGCGT GGGACGTCCG ACGAATCCGG AAATCCCTCT GGCAGTGACG
GTGGGAGATG TTCTCTTCAG TTTTTATATG ACCAATACCA AGGGGCAGAT CTCCTCAGGG
CTGGTGGAGG GAAAACCCAA GTTTACCATC CATATCAAAG CCGACGGTGT AGTCCACGAG
GCAAGCGTAC CTATGCTGAA TGAAGAGGAT CGGCCGGTCT TGGAAAAAGC TATTGAGGAA
AAGATTATAG ATGTGGTCTG GAAAACTGTC GCTAAGGCGA GAGAATGTGA TGCTGATATT
TTCGGCTTTA ACGAACACCT GCATCGATAT CACCTCAAAG AATGGAAGAC CATTGCTCCT
GAATGGCGCA GTTATTTTAG AGATGCTGAA ATTGAAGTGG AAGTAGATGC GGAAATTAAG
GCTTTCGGTA CATCCAACAC TGGGTTTGAT TTTTAA
|
|---|
| Protein sequence | MKKKAHGLLV ISLLASVLLM NGCWDSREVE DLAVSTLVAW DRVTVEGKDL WQISTRILDL
RVPQGSGGKK DSSARELLLK GTGITIQDAF NNLVKRLPAT DFVEHNVAII IGERVAREEL
PNIMSADLRL PFSRISVDMF VCEGEAYKIL QAEPELSSTL SKEVRKIADK TMEESGAALK
MTALDFSKQL IRKDRDTVLP RIRIYSKQEG EESVETSVEI QGFGVIRDSE LVGWLEDEEA
LGYVLSVGRP TNPEIPLAVT VGDVLFSFYM TNTKGQISSG LVEGKPKFTI HIKADGVVHE
ASVPMLNEED RPVLEKAIEE KIIDVVWKTV AKARECDADI FGFNEHLHRY HLKEWKTIAP
EWRSYFRDAE IEVEVDAEIK AFGTSNTGFD F
|
|---|
| |