Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2273 |
Symbol | |
ID | 7259242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | + |
Start bp | 2456449 |
End bp | 2458089 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 643562160 |
Product | Peptidoglycan-binding LysM |
Protein accession | YP_002458740 |
Protein GI | 219668305 |
COG category | [S] Function unknown |
COG ID | [COG1652] Uncharacterized protein containing LysM domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000673972 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTA ACAAGAAACG CTTTGCTATA GCTATCCTAT TGATAGCAAT CCTTGTCTTA ACAGGATGTA CAGCAAACCA AAAAGCCATC TTCGATGCCT CAATGAAGAT GCAAAAGGTC AATTCCATAC AACAGCATAT GACACTGTCT ATGGAACTCA AGGGTACAGG ACTGGACCCC ATGATTCAGG AGCAAGTCGA TCAAGTGGCG GCGATGCTCA ATGACACAAA GATTGAACTT AATCTTAAGA CCAAAACCAA TGAAAAGCAA ACCATGGTTC AATCCCAGGC AGATATGAAT TTCAGTATGC CGGGACTGGA GATGAAGATG CCCCTCTGGA TCGACATGGA TCTCACAGGA GATCAGCCTA AGTTTTTGGA GATCATTCAA ATGCCCCTCA TGGCTAAAGC ATCCTTGCCG CCTGAGTACA TGAGCAAAGA GTATATGGTT ATGGACCTTG CCAATACGAG CAGCTCAGAA TTAGCTCCGA TGGATATGAC CAAGCTGATG GACTTCAGTG TGAACTTTCA AACCAAGTGG ACGGACTTTT TGATAAGTTA TGCTGACCGT TTTAACCCTG GCCTGGAGGT CGTCAGTGTG CCCGTTCAGG ATCCTTCCAT CCAGAAATAC GCCATTCACC TTGATGACAA AGCATTTAAA GCTTTGTTAA GCTACACTGT CAATAATTTT GCCCAAGATA AAGAAGCCCA AGGCTTTTTG AATGATTATT TCCAAGCTGT TCTCGATCTG AGCGGCGGGG CCTCCTCTTT CGAAGGTGCC CTGGATGCTG AAGAGATGTT TGGCGACTCG GAAAGCTCTG CAGAGGCTTT AAGCCAGTTC AATGCGATCT TAGACTCCCT GCAGGATGTA ACTCTGGTCG GAGAGAGCGG TATTCAATTG ATCTACACCA TTTCCGATGG TTACATTACC CAGACTGAAG GAAGCTTTGA TCTGCAGATT GATTTGGCCC AAATGGCAGG CTTGTTGAAT ATTCCCAGTG AAGATGAGGA ATCAACAGAA GTCAGCGGCA TCCTGAATTT TATCATTAAC TATAAGGCAG AGAATTCCAA TATCAATCAA CCTCTTGATA TCCAAATTCC GGAATTAAGC ACGGAGAACT CTTTCGACTA CTTTGAATTT ATGGAGGCCT CTTTGTCTGC GCTGGAGAAC GTTGAGGTAG GCGTTGAGGA AGTTATTCAA GAACCTGCTC CGGAACCCGG CCCGGAACCT GTTCCACCGG CAGCCAATTC TTCTGAGGAG TCCGTTGCAG CGGCATCCGC ACCTACGGAT TATACAGTGC AGCCGGGCGA TACATTAGCG ACGATCGCGC TTAATCACTA CGGAAGCTAT GAACAGCATG CCGGCATCTA CCAAGCCAAT TTGGCAGCTT TTAAGAAGAA TGGCAACCGG CTGGATGCAG GAATGGTCCT GACTCTTCCG GCTGAAGGAC TGCTTGCACC ATTGCCTGCG GAGAACGTAA AGCAAGTCTA TACAGTAAAA GCAGGGGATA CTTTAGGGAG CATAGCTAAA CAAATCTACG GTGACAGTTC CCTCTATACC AAAATCTATG AAGCCAATCA AGAAAGATTA AAGAGCCCCA ACCTGATTTT TGAAGGGCAA AAGCTGGTAA TCCCTAACTG A
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Protein sequence | MKINKKRFAI AILLIAILVL TGCTANQKAI FDASMKMQKV NSIQQHMTLS MELKGTGLDP MIQEQVDQVA AMLNDTKIEL NLKTKTNEKQ TMVQSQADMN FSMPGLEMKM PLWIDMDLTG DQPKFLEIIQ MPLMAKASLP PEYMSKEYMV MDLANTSSSE LAPMDMTKLM DFSVNFQTKW TDFLISYADR FNPGLEVVSV PVQDPSIQKY AIHLDDKAFK ALLSYTVNNF AQDKEAQGFL NDYFQAVLDL SGGASSFEGA LDAEEMFGDS ESSAEALSQF NAILDSLQDV TLVGESGIQL IYTISDGYIT QTEGSFDLQI DLAQMAGLLN IPSEDEESTE VSGILNFIIN YKAENSNINQ PLDIQIPELS TENSFDYFEF MEASLSALEN VEVGVEEVIQ EPAPEPGPEP VPPAANSSEE SVAAASAPTD YTVQPGDTLA TIALNHYGSY EQHAGIYQAN LAAFKKNGNR LDAGMVLTLP AEGLLAPLPA ENVKQVYTVK AGDTLGSIAK QIYGDSSLYT KIYEANQERL KSPNLIFEGQ KLVIPN
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