| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2264 |
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| Symbol | |
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| ID | 7259233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 2442361 |
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| End bp | 2444520 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643562151 |
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| Product | diguanylate cyclase and metal dependent phosphohydrolase |
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| Protein accession | YP_002458731 |
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| Protein GI | 219668296 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2206] HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000689674 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATAC ATAATTTGCT TTCAGCATTT TCTTTACTTG CTGCAGTTAT TTATATGTCT
TTTGGTATTT ATACATACAG ACAGAGTCCT CAATCCCGCA TCCATCAATC TTTTCTCCTT
TTATGTCTGA GTTATTCAAT TTGGTCTTTT GCCTATGCCT TTGCTTATCT GGCTCAGGAT
GCCTTCGCCT TTTCCTTTTG GAATAAGCTG TCCGCTCTGG GCTGGTGCAG TTTTAGCGCT
CTGATCCTTT ACCTTGTTCT GCACATCACC GAAAGTCCTC TGGTAAAAAA CGCCGGGATT
AAGTTCATGA TCTTTTTGCC TGGTTTTGTT TTTTATGTAC TTGCCGTATT CTTTTTTGGC
CCGAATCTGG AGACTCCTAC CCAAGTGGTC AAATTTTTCT ATGTTGGTGA CTTTCTATAT
GATTTTTCCT ATTTGCTTAT CGCCATTGCC TTGATGTTTA AGTGGGGGTA TGTATCACCC
CATATCCGGA TTAAAAAACA ATCCCGGATC CTCGTCATCA CAAGCCTGAT CCCATTTTTA
TTAAACTTGA TGACCCAGAC CATTTTACCT GCCCTGCTCC ACATTGATCT TCCCGGGATG
GGACAACTTT ACTCTCTGAT CATGATTTTT GGTGTTTTTG TTGTGGTAAC CCGTTATAAC
TTTTTTAAAC TTCCGGAAAG CATCATTATG CAGGAGATTA TGAATGAAAC GCTGGATATG
GTGATTGTGG CGGACCAGGA AGGCCGGATA CGGAAGGTAT CCAGCCAGAT GAAAGCCTTG
CTTGGTTATG ATGCAGATGA AGTTATAGAC CACACTCTGG GATTTCTTTT TCGGGAAGGG
GATCAAGGCA AATTTGACTT GCTCCAAATG AAAAACAGGG ATCTTAAGTA TACAGATATA
GAAGTAATCA AGAAAGATCA AGGGACCCTG CCCGTCAATG TAGTATGCAA ACAGATTAAA
GATAGAAGAC TCCAGGATGT CATAGGTTTT GTGTTCATCC TGCAGGATAG TCGTCTTGTA
AATGAACTCA GACAAAAGAA TGAGGAGCTC TTTTGGGAAA AAGAAAGATA TAAACTAAGT
TTACAATCTG TCAAAGAGAA GCAAGAGAAG ATCGAATATT TAAGTTACCA CGACCAGCTT
ACCGGTCTTT ATAATCGCAG ATTTCTGGAA GAGAAGCTCA CCCGCATTGA CTTTAATCAG
GATTTGCCCT TGACGATTAC GATGGCGGAT GTCAACGGAC TGAAGCTTGT CAATGACTCT
TTCGGGCATG CTTATGGAGA TCTGTTGATT CGCAAAGTCG CTGAGGTCAT TCAGGAGGGG
TGCCGGCAGG ATGACGTGGT GGCCAGGATT GGTGGGGATG AGTTTATTAT CCTCATGCCC
AGGACCACTG AATTTGAGGC GCGAAGGGTG ATCAAGGTGA TCAAAGCCAT GGCCGTGCAG
GAAAAAATCG GCGCCTTCGA ATTGTCCGTC TCTTTTGGGT ACGAAACCAT GGAGACTTCC
GAAAAGAGCA TTAGTGAACT GCTGAAAAAA GCCGAAGATT ATATGTATAA GAACAAGCTG
TCGGAAAGCC CCAGTATCAG AAGCAACACC ATTGACACCA TTATTAAGAC CCTGCATGAA
AAGAATAAAC GGGAAGAGCA GCATTCCCAT CGAGTCTCGG AATTATGCAG GAAGACAGCT
ACCGAACTGG ACTGTTCCAA TGACGAAATT GAGGAACTTA AGACAGTGGG TCTGCTCCAC
GACATTGGGA AAATTGTCAT TAGTGAAGCC ATCTTGAACA AGCCGGGTAA ACTCCGGGAT
GATGAATGGA AAGAGATTGA GCGTCATCCC GAGATCGGTT ACCGTTTGCT GTGTACTATC
AAAGAGATGT CGGAAATGGC AGAGTACGTC CTCGCCCATC ATGAACGATG GGATGGCACA
GGATATCCTA AGGCTTTAAA GGGGAAAGAA ATTCCTCTTC AGGCTAGAAT TATAGCCATT
GCCGATGCCT ACGATGCCAT GATCAGTGAG AGAAGCTATC GCAAAGCTTT GCCTGAAGAA
GTGGCTGTAG CCGAGCTGAT CAAGAATGCC GGAACCCAGT TTGATCCCGA GCTTGTGAAG
GTTTTCGTAG AGAAAGTTCT GGGGAAAAAG ATCTATAGCG AGTCCGGATG TGTACATTAA
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| Protein sequence | MTIHNLLSAF SLLAAVIYMS FGIYTYRQSP QSRIHQSFLL LCLSYSIWSF AYAFAYLAQD
AFAFSFWNKL SALGWCSFSA LILYLVLHIT ESPLVKNAGI KFMIFLPGFV FYVLAVFFFG
PNLETPTQVV KFFYVGDFLY DFSYLLIAIA LMFKWGYVSP HIRIKKQSRI LVITSLIPFL
LNLMTQTILP ALLHIDLPGM GQLYSLIMIF GVFVVVTRYN FFKLPESIIM QEIMNETLDM
VIVADQEGRI RKVSSQMKAL LGYDADEVID HTLGFLFREG DQGKFDLLQM KNRDLKYTDI
EVIKKDQGTL PVNVVCKQIK DRRLQDVIGF VFILQDSRLV NELRQKNEEL FWEKERYKLS
LQSVKEKQEK IEYLSYHDQL TGLYNRRFLE EKLTRIDFNQ DLPLTITMAD VNGLKLVNDS
FGHAYGDLLI RKVAEVIQEG CRQDDVVARI GGDEFIILMP RTTEFEARRV IKVIKAMAVQ
EKIGAFELSV SFGYETMETS EKSISELLKK AEDYMYKNKL SESPSIRSNT IDTIIKTLHE
KNKREEQHSH RVSELCRKTA TELDCSNDEI EELKTVGLLH DIGKIVISEA ILNKPGKLRD
DEWKEIERHP EIGYRLLCTI KEMSEMAEYV LAHHERWDGT GYPKALKGKE IPLQARIIAI
ADAYDAMISE RSYRKALPEE VAVAELIKNA GTQFDPELVK VFVEKVLGKK IYSESGCVH
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