Gene Dhaf_2258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2258 
Symbol 
ID7259227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2436552 
End bp2438096 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content48% 
IMG OID643562145 
ProductABC transporter related 
Protein accessionYP_002458725 
Protein GI219668290 
COG category[R] General function prediction only 
COG ID[COG3845] ABC-type uncharacterized transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0334051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATT ATATTATTGA GATGCTCAAC ATCACCAAAG AATTCCCCGG CATCATTGCC 
AACGACAATA TCACTCTGCG TTTAAAAAAA GGCGAGATTC ATGCTCTACT GGGAGAAAAC
GGGGCCGGAA AATCCACCCT GATGAGCGTT TTATTCGGTT TGTATCAACC GGAAAAAGGT
GAAATCCGCA AGAACGGCAA CACCGTAAAA ATCAACAACC CCAATGACGC CAATGCCTTA
GGCATCGGCA TGGTCCATCA GCATTTTAAA TTGGTGGAGA TCTTTACCGT TCTCGAAAAT
ATTATCTTGG GAGTTGAGCC CCATGCCCTT GGTTTTTTAC AAAAGAAAAA AGCCAGGGAA
AAAGTCGTTG AGCTGAGCAA GCAGTATGGA CTGGAAGTCA ATCCTGATGC TCTTATTGAA
AAAATATCCG TGGGCATGCA GCAAAGGGTT GAGATTCTCA AAATGCTCTA TCGGGATAAT
GAGATTTTAA TCTTTGATGA ACCCACAGCG GTTTTAACCC CTCAGGAAAT TGATGAACTT
ATGGAAATCA TGCGCCGTTT TGCCAAAGAA GGCAAATCGA TCTTATTCAT AACTCATAAA
TTAAACGAGA TCATGGCAGT TGCCGATCGT TGCACCGTAT TGCGCAAAGG GCAATATGTA
GGCACTGTTG ACATAAAAGA TACCACCAAA GAAGAACTCT CCCGGATGAT GGTGGGCCGG
GATGTAAGTT TCCGGGTTCA AAAAGAAACG ATGACCCCCG GCCGGGTGGT CTTATCTGTA
AGAAATGTCT CCGTTCCCTC CAAAACCAGT AAGAAGAATG CTGTCAGCAA CGTGTCTTTC
GATGTTCGCG CCGGTGAAAT CGTCTGCCTG GCCGGTATCG ACGGCAATGG ACAGACCGAA
TTCGTCTCTG CCCTGACCGG GCTGGAAAGA CACACAAGCG GTACGATCAC CCTTTGCGAT
CAGGATATCA GCAAAGCTTC CGTCCGCACC CGTTCCCAAG CAGGGATGAG CCATATTCCT
GAAGATCGGC ACAAATACGG CCTGGTCCTG GATTATACCC TGGAAGACAA TCTGGTCATC
CAGCGTTATT GGCAGCCACA GTTCCAACGG TTTGGCTTTA TCAGGCGCAA AGCCGTGCGC
TCCTATGCCG AAGGATTAAT CAAACAATAC GATGTACGCA GTGGACAAGG ACCTCTGACC
ATCGCCCGCA GTATGTCCGG GGGCAATCAG CAAAAAACCA TTATCGGCAG GGAAATCGAT
AAGGATCACG AACTGTTGGT GGCCGTGCAG CCTACCCGGG GCCTGGATGT AGGCGCTATC
GAATATATCC ATAAGCAACT GGTAGCCAGG AGAAATGCCG GAAAAGCGGT TTTGCTGGTC
TCCCTGGAAC TCGATGAGGT CATGAATGTC AGCGACCGGA TTCTGGTCAT GTATGAAGGG
GAAATCGTGG GGGAACTGGA CCCCAAAACC ACCACCGTAC AGGAGCTGGG TCTTTACATG
TCCGGGGCAA AACGCAACCT GAAGGAGGGC TCCCATGCAG GATAA
 
Protein sequence
MNDYIIEMLN ITKEFPGIIA NDNITLRLKK GEIHALLGEN GAGKSTLMSV LFGLYQPEKG 
EIRKNGNTVK INNPNDANAL GIGMVHQHFK LVEIFTVLEN IILGVEPHAL GFLQKKKARE
KVVELSKQYG LEVNPDALIE KISVGMQQRV EILKMLYRDN EILIFDEPTA VLTPQEIDEL
MEIMRRFAKE GKSILFITHK LNEIMAVADR CTVLRKGQYV GTVDIKDTTK EELSRMMVGR
DVSFRVQKET MTPGRVVLSV RNVSVPSKTS KKNAVSNVSF DVRAGEIVCL AGIDGNGQTE
FVSALTGLER HTSGTITLCD QDISKASVRT RSQAGMSHIP EDRHKYGLVL DYTLEDNLVI
QRYWQPQFQR FGFIRRKAVR SYAEGLIKQY DVRSGQGPLT IARSMSGGNQ QKTIIGREID
KDHELLVAVQ PTRGLDVGAI EYIHKQLVAR RNAGKAVLLV SLELDEVMNV SDRILVMYEG
EIVGELDPKT TTVQELGLYM SGAKRNLKEG SHAG