Gene Dhaf_2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2248 
Symbol 
ID7259217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2427405 
End bp2428352 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content54% 
IMG OID643562135 
ProductABC transporter related 
Protein accessionYP_002458715 
Protein GI219668280 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGAAT TCGTTATTCA AACCTGGAAT TTAACCAAAC ACTATGATGG CAAAGCCGGG 
TGCTCAGATG TGAGCTTACA GGTCCCTCCC GGTGTCGTCT ATGGTTTTAT CGGACCCAAT
GGTGCGGGAA AGAGCACTTT TGTCAGAACC TTGCTGGGCC TAATCCACCC GACCTCAGGA
CGGGCGGAAA TCCTCGGCCA TCCCCTCAAC AATGTTAAAG CCCGGGCGAA GGTAGGCTAT
CTCCCCGAGC TTTTCCGCTA TCCCGATTGG CTTACAGGAG CCCAACTGCT AGAGCTCCAT
GGAGATTTGG CCGGAGTGCC TCCCGCGGAG CGGCAGCGGC GCATTCAGAG TTTAGTGGAA
CGAGTGGGGT TATCCGGCCG TGAGCAGGAA AAAATCCGGC GCTACAGCAA AGGAATGCAG
CAGCGCATCG GTTTGGCTTG TGCCTTGATC TCCGATCCTG AACTGATCTT TCTTGATGAG
CCCACCTCCG CCCTGGACCC TATCGGCCGC CGGGACGTGC GGGATCTCAT TCTTGCCCTG
CGCAAGGAAG GAAAGACGGT GTTTCTCAAC AGCCATCTCC TGGCCGAAGT AGAAAATGTC
TGCGACCAAG TGGCCATTAT CAATCAGGGA AAAGTGGCCG CCCAAGGAGA CTGGCGGACT
CTCTGTGACT TTAAATCGGA AATTAAACTG CGGGCTCAGG GGTTAACTCA GGACATCCTG
AACACGATGA ACTCACTGGT TCAGAATACC GAGCTTTTAT CCCAAACCCA GGAAATCTCC
GAATGGCGGG TGCAGCTCAG CTCGGGGGAG GCTGTGCCGG AGCTGATCCA TTACCTCAGC
GGGATGGGAA TTGGGCTCTA TGAGGTGGTT TCCCTGCAGC CCCATTTGGA AGAGGTGTTT
ATGTATTGGG TGGAGCGAAA GGAGAGAGAA TATGCTGTCC ATCATTAA
 
Protein sequence
MSEFVIQTWN LTKHYDGKAG CSDVSLQVPP GVVYGFIGPN GAGKSTFVRT LLGLIHPTSG 
RAEILGHPLN NVKARAKVGY LPELFRYPDW LTGAQLLELH GDLAGVPPAE RQRRIQSLVE
RVGLSGREQE KIRRYSKGMQ QRIGLACALI SDPELIFLDE PTSALDPIGR RDVRDLILAL
RKEGKTVFLN SHLLAEVENV CDQVAIINQG KVAAQGDWRT LCDFKSEIKL RAQGLTQDIL
NTMNSLVQNT ELLSQTQEIS EWRVQLSSGE AVPELIHYLS GMGIGLYEVV SLQPHLEEVF
MYWVERKERE YAVHH