Gene Dhaf_2246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2246 
Symbol 
ID7259215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2424611 
End bp2426563 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content50% 
IMG OID643562133 
ProductABC transporter related 
Protein accessionYP_002458713 
Protein GI219668278 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGGAT TCAGAGGCGG GCCGGGAAAG AGTTCGGCTC ATGGCAGGGG ACTTCCCGGC 
GGGAAACCGC CCCATGACAA ATTCAACCCC CAGACAGCCA AACGGCTTTT GTCTTATTTG
CGGGATTACA AGGTGCAAAC CTTCTTCGTT ATGGTCGCTA TTCTGATCAG TGCCCTGGTC
GGGGTTCTGT CTTCCGTATT CCTTAAAATC CTGATCGATG ATTATATTGC ACCTCTTCTT
CTGGAGGCCG TTCCCAACTA TGCCGGATTG CTGCGGATCA TAATGGTGAT GGCAGGGATT
TACCTGATTG GCGTTCTGGC CACCTTAATC TACAACTGGA TTATGGTGTC GATCTCCCAA
GGCATCTTAA AGAAAATCCG GGATGAGATG TTTTCCCATA TGCAGAAGCT GCCGGTTAAA
TACTTTGATT CCCATACTCA TGGGGATGTG ATGAGCCATT ACACCAATGA TACGGATACC
TTAAGACAGA TGATCTCTCA GGGTATCCCT CAGACCTTTT CTTCCTTCAT TACGATTGTG
GCGGTTTTCT TTGCCATGCT TTACCTCAGT GTCTGGCTGA CCGTGTTTGT GGTCTTGTGT
ATTTTCCTAA TCCTAAAGGT TATTGGCAGC ATCGCCGGCA AGAGCGGCAC CTATTTTATG
CAGCAGCAGC AATCCCTGGG AACTCTCAAT GGCTATATTG AGGAAATGAT CCATGGCCAG
CGGGTGGTCA AGGTCTTCAA CTATGAGGAA AAAAGCAAAG AGTCCTTTAA CCGCAAAAAT
GAAGAGCTTT GCGCCCATGC CACCGCCGCC AATTCCTATG TCAATATCAT CATGCCCATG
ATGAGCAATT TTGGCTATCT CCTTTATGTA GCGTTGGCCA TTGTGGGAGG TCTCCTAGTG
ATTGGAGGAG TGACCAATCT GACCATCACC GGGACCAATG CACTCACCCT GGGAACCATT
GCTTCTTTTC TGCAGTTGTC CCGCAGTTTT ATCATGCCCA TTGCGCAGGT GTCCCAGCAG
TTGAATGCCA TTATTATGGC TTTGGCAGGG GCGGAACGGA TCTTCAAACT CCTTGATGAA
AAGCCGGAAA AGGATGAAGG GCAAGTGACC TTGGTCCATG TCAAACAAGA AAGGGGCCCC
ATAGTTGAAA CCAGCTCGCA TACCGATGGG TGGGCCTGGA AAATTCCTCA GGAAGATGGC
ATGGTGGACT ATCGGGAGCT TAAAGGAGAA GTCCGTTTCT TCGATGTGGA CTTTGGCTAC
GAGGAGAACA AGATGGTTCT GCACAACATC ACTTTGTATG CCGAACCCGG GCAAAAGGTG
GCTTTTGTGG GGGCTACGGG AGCGGGCAAG ACCACTATTA CCAATCTCAT CAACCGTTTC
TATGATCTGG CCGACGGCAA GATCCGCTAT GACGGTATTA ATATCAATAA AATCAAAAAG
GAGGACTTGC GCCGCTCCTT AGGTATCGTG CTCCAGGATG TCAATCTGTT TACAGGGTCA
GTGATGGAAA ATATCCGCTA TGGCCGCCTG GATGCCACGG ATGAGGACTG TATCGCGGCG
GCCAAGCTGG CCAATGCCGA CGGTTTTATC CGCATGCTCC CCCAAGGTTA TCAGACAGTT
CTTTCCGGGG ACGGCAGCGG TTTATCCCAG GGTCAGCGGC AGCTCATCTC CATTGCCCGT
GCTGCGGTAG CAGATCCGCC GGTGATGATT CTCGATGAAG CCACTTCCTC CATCGATACC
CGCACCGAGG CCATCGTCCA ACGGGGCATG GACTCCTTAA TGGAAGGGAG AACGGTCTTT
GTCATTGCCC ACAGGCTTTC CACCGTCAAA AACTCCGATG TGATCATGGT ACTTGAGGAG
GGGAGAGTTA TTGAACGGGG CAGCCATGAG AAGCTGATTG CTGAAAAGGG CAAATATTAT
CAGCTTTATA CAGGAGCCTT TGAACTGGAG TAG
 
Protein sequence
MMGFRGGPGK SSAHGRGLPG GKPPHDKFNP QTAKRLLSYL RDYKVQTFFV MVAILISALV 
GVLSSVFLKI LIDDYIAPLL LEAVPNYAGL LRIIMVMAGI YLIGVLATLI YNWIMVSISQ
GILKKIRDEM FSHMQKLPVK YFDSHTHGDV MSHYTNDTDT LRQMISQGIP QTFSSFITIV
AVFFAMLYLS VWLTVFVVLC IFLILKVIGS IAGKSGTYFM QQQQSLGTLN GYIEEMIHGQ
RVVKVFNYEE KSKESFNRKN EELCAHATAA NSYVNIIMPM MSNFGYLLYV ALAIVGGLLV
IGGVTNLTIT GTNALTLGTI ASFLQLSRSF IMPIAQVSQQ LNAIIMALAG AERIFKLLDE
KPEKDEGQVT LVHVKQERGP IVETSSHTDG WAWKIPQEDG MVDYRELKGE VRFFDVDFGY
EENKMVLHNI TLYAEPGQKV AFVGATGAGK TTITNLINRF YDLADGKIRY DGININKIKK
EDLRRSLGIV LQDVNLFTGS VMENIRYGRL DATDEDCIAA AKLANADGFI RMLPQGYQTV
LSGDGSGLSQ GQRQLISIAR AAVADPPVMI LDEATSSIDT RTEAIVQRGM DSLMEGRTVF
VIAHRLSTVK NSDVIMVLEE GRVIERGSHE KLIAEKGKYY QLYTGAFELE