Gene Dhaf_2228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2228 
Symbol 
ID7259197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2407556 
End bp2408281 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content49% 
IMG OID643562117 
ProductABC transporter related 
Protein accessionYP_002458697 
Protein GI219668262 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0571204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAGTGA ACCCACTTGT TGAAATCAGG GACTACTCCC TTGAATTAGG AAAATTTAAA 
TTGCAGCCCA TCAATTTGAT GATCCACGAA AGGGAAATTT TCGGAGTCTT AGGGAAAACC
GGCTCAGGAA AAACCGTGCT TCTGGAATCC ATAGCAGGTT TTTATCGGGG CCGCTCCGGA
CAGATATATA TTCAGGGTCA GGATATCGCC GAAGTGCCGC TGGAGAAAAG GGGCATTGGT
TTCGTGTACC AGGATTTTGG CTTATTTCCC CACATGACGG TAGCCGATAA TATCGGGTAT
GGGTTGAGAA TGCAAAAGAA GGAAAAACAG ACCATCAAGG ATGAGGTAAA TCGGATGGCG
GAAATTCTCG CCATCAGCTC GATTCTGAAA CAGTACCCCG GAACCCTAAG CGGCGGGGAA
CGGCAAAGGA CGGCTATCGC CAGGGCCCTT ATCCTGAACC CCAGGATTCT CTTGCTGGAT
GAGCCCTTTT CTTCCCTGGA CCCGGCTACC AAGGAAACCA TGTACCGGCA GGTGAAAGAA
ATCCACCGGC TTTTTGGCTG TACCATTCTC TTTGTAACCC ATGACTTTAA GGAAGCCCAG
AGCATGGCGG ACCGGATCGG AATCATGATC AAAGGGGAAT TGAAACGTAT CCGCCGGAGC
ACGGAACTCT TTGTCCAGGA CAGCGATGAG GAAGTCAATC GGTTTTTGGG GCTGAACAGA
GAATAA
 
Protein sequence
MAVNPLVEIR DYSLELGKFK LQPINLMIHE REIFGVLGKT GSGKTVLLES IAGFYRGRSG 
QIYIQGQDIA EVPLEKRGIG FVYQDFGLFP HMTVADNIGY GLRMQKKEKQ TIKDEVNRMA
EILAISSILK QYPGTLSGGE RQRTAIARAL ILNPRILLLD EPFSSLDPAT KETMYRQVKE
IHRLFGCTIL FVTHDFKEAQ SMADRIGIMI KGELKRIRRS TELFVQDSDE EVNRFLGLNR
E