Gene Dhaf_2213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2213 
Symbol 
ID7259182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2389368 
End bp2392475 
Gene Length3108 bp 
Protein Length1035 aa 
Translation table11 
GC content49% 
IMG OID643562102 
Producthypothetical protein 
Protein accessionYP_002458682 
Protein GI219668247 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTAAAG AGGAAATAGG CTTCAATCCC ACTAAAAAGC TACTGACTGC AGAGGCTTAT 
CAATATAATG CACGGTCTGA CGGCATTAAG AAAGTTTATA CCAATGATGA TGAGATAAAA
GAATATGGGG ATCAGGGCAT CCTTGATCCT CATCAAGTCT CTTATTTTAA TTTATTCATC
AACGGTGTAT TGCAGCCTAA GGTTAACTAT GAGCTTCATG AAGGCCTGCT CGTCCTTAAA
ACAGAAGATG CTCCTTTACA GGGCTCTCCT ATAATCATCA CTTTCGTTAC TTTTAGGGAT
GAGGAACCCG CTCTGCTCAA TTCCGCCCTG GCTGAAGGGA TCCTGCCTTC GGGGCAGCTA
TCCCGCGGCC CGGTGACCGA TAGAGGGATT GAGGTAAGTG ATACGGCCCG CCCTGATCTA
AAGCTGGAAA AGCTGACCCT GTCCGGGCCC GAGTCTCTGG CCGCCGGTCA GGCGGCCACC
TGGGTATTTA CCATTACCGT AAGCAATCAA GGGGCTCTGC CTATTCGTGA TATCGTGGTC
AGGGAATTTA TCCTCCTGGA TTCTGTGCTG GCTATAGAAA CTCTGTCTTT GTCTCAAGGG
GATCTGGCTC TTGATGATGA TCTGATCACC TGGACTATTG ATCATTTAAA TCCTGAAGAA
TCTGCCGCCG CAAGCTTCCG TGTGGAGGGT CTGTTTAAAG CCGCCGGCAC CCGCTTCCTC
AGCCGGGGTT CGGCTACAGG CCGCAGCTCA GCAGCGGCTG TACGAACCGA CATAATCGGG
GCAGGTCCCG TCGCTGTCAG TAAAGGATTG GAGCTTACCA ACACGATTCT GTCCGGACCC
ACCCAGGTAA CCAGGGGCCA AACCTGTACA TGGCGAGTGG AGCTCAAACT GACTAATCTT
AGTGGTGTTG AGCTGTCCGA TCTTCTGGTC ACCGATACCC TGTTGATTGA GAACATCAGC
AATGTGAATG TGGTCAGCAT CTCCCATGGT GATGCTCATC TGGTAAACAG GGAAATCCAC
TGGAGCCTTA CTGGACTGAA ACCTTTGGAA ATGGCTGTTC TCGCTCTAGA TATAACAGGG
TCTTTTACCC AGGAAGGTTT GAGTAGCTTA GACACTGCAT CCGGTTCGGG CAAGCTGGGA
ACCGGCAAAC CAGAAACCGG CAGGCTATCC ACAAATCTTG CCCGGGATGT TCAAATCATC
GTTCTGCCGG AAATCATTCC GGTTCAGGAA GCGCTGTTCT TGCAAACCTC TGTCTTAACT
ATCCCTCTGA GCGGATCCTT AGGTACTCCC AAACGCTGGG AGCTATCTTT AGAGATCACC
AACCTCAGCA ATGAGGTGAT CCGCACTATC CTGGTCACCG ATACTATCCT GCTTGATGAA
TTTAAGTGGA CGGACACGGT CTTTGTCTCC TCAGGGGAGG TGGCCACCGC CCATAATACC
CTGCTCTGGA CTATAGAAGA GCTCTTGCCC GGCAGAACCC TAACCGCCCG GTTTGCAGTC
GAAGGGCTTT TTAATACCAC CGGCCTGCGT TCGCTCAGCA GGGCTGTCGC CTCAGGATGG
AGTCTGAATT CTTGTGTACT GTCCAACATT GCTTCCGGAG CACTCATCCG CATCTCAGGC
TATATTTTTG CTTGTGTTAT TGTCGACAAA GTCTTTTCTC AGTGTCAGGA TCGGTACTGC
TTTGAAGATA TAGCCCTCCC CATCTCCGCT TTTCAGAGGA TTCTCTTTAA ACCGGGACGT
ATTATGGAAG ACACTCTGGA GATCACTGCT ATAAGAGATC GCCCCAATTT TAAAAGAGTT
CAATTCCTTT TAAAGATACC CTTTACAATC GTTGCCGGAG GCACGACGCT GGGCCAGGAC
TCTCTGCCCC CTATCCCTAT GGACCTCATC ATGTTCATGC CGGAACCACG GGATGAGTTT
TCTTATGATG TTGTGGTGGA AACCCGTTCT GAGCTGCTCG GCTCTCCCGA CGGTTGTGAG
GAAGGCCGGC ATTGTACCGT AGGGGTATTT ATCGTGATCA AAGCCGTGGG CAAAGTACAG
TTATTGATCC CCAGCCTGGA GGTTGATCCT GAGCCTCCCC TGTGCGAGGA GTTTTTGCCG
AATCAGCTCT GCGCTGGTTT TAAAACAGTG GTTTTCCCGG ATTTTTATCC TTCGCAAAAT
ACGGTGCAAA GTAGTTTTCA GGACAGACTC CAAGATAAGC TCCAGACGAT ACTCTCACCC
CCTAACCCTC CGGCTCAGCT CAGGGAAGCT CTCCCCTGCC CCCCGGTCTT CGGCAACCTG
ACTCTGGAAA AATACATCAC AGCAGGACCT TCAGTAGTAA ATCCTCAAAC GAATGGTACC
TGGACCATCG AAATTAAGCT TATCAATGAC GGTTATGGTC CGGTCAGCAA TGTGGTTATG
AGCGATACCA TACTGGCAGA TAGCTTAGCC GTCATTAACG TCCTCAGCCT TACCCAAGGC
ACAGTATTTC AAGAGGAGAA TAAGTTGCTC TGGGATATCG GGACCCTCAA TTCAATGGAC
ACCGTTGTTT TGGCGGCAGA GGTAACAGGT TCTTTTAATG CCCAAACCAG TGCACTTCTC
CAAGGCGAAA ACCAACAGTA CAATGCACTT GCCGATGGAG TTAAGACTGC TTTTACCGAC
AATGATGAGT TGCTCATCTA CGGCAATCAG GGAATACCCG ACCCTAGGGA AATTTCCTTT
ATTAATCTTT ATATCAATGG GGTATTGCAG CCTCAAACTA ACTATAAAGT AAGGCCAGGA
CTTCTCATCC TGACCGTAGA CAGCCCTCCC CAAAAGGGAG TCCCCGTTAT TCTTGAATCA
CTGATTATCA GGGACAGCAA GGATACTCTT TTAAAAGCGG AACTCTATCA ATACAACACT
CGGGCCAATG GTCAAAGAGA GTATACCAAT GCCGATGAAA TAACCATGTA CGGTGATCAA
GGAATCCTCG CCCCTCAGCA AACTTCTTAT CACTACCTCT TTATCAATGG AGTTATCCAG
CCTAAAAGCA ATTATACCCT TGAAAAAGGT CTCCTTACCC TGAAGGTTGC CCACCTGCCT
CTGGAAGGAG TACCCATGTC CATCCAGTTT GTTTCTTTAT ATTCATGA
 
Protein sequence
MFKEEIGFNP TKKLLTAEAY QYNARSDGIK KVYTNDDEIK EYGDQGILDP HQVSYFNLFI 
NGVLQPKVNY ELHEGLLVLK TEDAPLQGSP IIITFVTFRD EEPALLNSAL AEGILPSGQL
SRGPVTDRGI EVSDTARPDL KLEKLTLSGP ESLAAGQAAT WVFTITVSNQ GALPIRDIVV
REFILLDSVL AIETLSLSQG DLALDDDLIT WTIDHLNPEE SAAASFRVEG LFKAAGTRFL
SRGSATGRSS AAAVRTDIIG AGPVAVSKGL ELTNTILSGP TQVTRGQTCT WRVELKLTNL
SGVELSDLLV TDTLLIENIS NVNVVSISHG DAHLVNREIH WSLTGLKPLE MAVLALDITG
SFTQEGLSSL DTASGSGKLG TGKPETGRLS TNLARDVQII VLPEIIPVQE ALFLQTSVLT
IPLSGSLGTP KRWELSLEIT NLSNEVIRTI LVTDTILLDE FKWTDTVFVS SGEVATAHNT
LLWTIEELLP GRTLTARFAV EGLFNTTGLR SLSRAVASGW SLNSCVLSNI ASGALIRISG
YIFACVIVDK VFSQCQDRYC FEDIALPISA FQRILFKPGR IMEDTLEITA IRDRPNFKRV
QFLLKIPFTI VAGGTTLGQD SLPPIPMDLI MFMPEPRDEF SYDVVVETRS ELLGSPDGCE
EGRHCTVGVF IVIKAVGKVQ LLIPSLEVDP EPPLCEEFLP NQLCAGFKTV VFPDFYPSQN
TVQSSFQDRL QDKLQTILSP PNPPAQLREA LPCPPVFGNL TLEKYITAGP SVVNPQTNGT
WTIEIKLIND GYGPVSNVVM SDTILADSLA VINVLSLTQG TVFQEENKLL WDIGTLNSMD
TVVLAAEVTG SFNAQTSALL QGENQQYNAL ADGVKTAFTD NDELLIYGNQ GIPDPREISF
INLYINGVLQ PQTNYKVRPG LLILTVDSPP QKGVPVILES LIIRDSKDTL LKAELYQYNT
RANGQREYTN ADEITMYGDQ GILAPQQTSY HYLFINGVIQ PKSNYTLEKG LLTLKVAHLP
LEGVPMSIQF VSLYS