Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dhaf_2213 |
Symbol | |
ID | 7259182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfitobacterium hafniense DCB-2 |
Kingdom | Bacteria |
Replicon accession | NC_011830 |
Strand | - |
Start bp | 2389368 |
End bp | 2392475 |
Gene Length | 3108 bp |
Protein Length | 1035 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643562102 |
Product | hypothetical protein |
Protein accession | YP_002458682 |
Protein GI | 219668247 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTTTAAAG AGGAAATAGG CTTCAATCCC ACTAAAAAGC TACTGACTGC AGAGGCTTAT CAATATAATG CACGGTCTGA CGGCATTAAG AAAGTTTATA CCAATGATGA TGAGATAAAA GAATATGGGG ATCAGGGCAT CCTTGATCCT CATCAAGTCT CTTATTTTAA TTTATTCATC AACGGTGTAT TGCAGCCTAA GGTTAACTAT GAGCTTCATG AAGGCCTGCT CGTCCTTAAA ACAGAAGATG CTCCTTTACA GGGCTCTCCT ATAATCATCA CTTTCGTTAC TTTTAGGGAT GAGGAACCCG CTCTGCTCAA TTCCGCCCTG GCTGAAGGGA TCCTGCCTTC GGGGCAGCTA TCCCGCGGCC CGGTGACCGA TAGAGGGATT GAGGTAAGTG ATACGGCCCG CCCTGATCTA AAGCTGGAAA AGCTGACCCT GTCCGGGCCC GAGTCTCTGG CCGCCGGTCA GGCGGCCACC TGGGTATTTA CCATTACCGT AAGCAATCAA GGGGCTCTGC CTATTCGTGA TATCGTGGTC AGGGAATTTA TCCTCCTGGA TTCTGTGCTG GCTATAGAAA CTCTGTCTTT GTCTCAAGGG GATCTGGCTC TTGATGATGA TCTGATCACC TGGACTATTG ATCATTTAAA TCCTGAAGAA TCTGCCGCCG CAAGCTTCCG TGTGGAGGGT CTGTTTAAAG CCGCCGGCAC CCGCTTCCTC AGCCGGGGTT CGGCTACAGG CCGCAGCTCA GCAGCGGCTG TACGAACCGA CATAATCGGG GCAGGTCCCG TCGCTGTCAG TAAAGGATTG GAGCTTACCA ACACGATTCT GTCCGGACCC ACCCAGGTAA CCAGGGGCCA AACCTGTACA TGGCGAGTGG AGCTCAAACT GACTAATCTT AGTGGTGTTG AGCTGTCCGA TCTTCTGGTC ACCGATACCC TGTTGATTGA GAACATCAGC AATGTGAATG TGGTCAGCAT CTCCCATGGT GATGCTCATC TGGTAAACAG GGAAATCCAC TGGAGCCTTA CTGGACTGAA ACCTTTGGAA ATGGCTGTTC TCGCTCTAGA TATAACAGGG TCTTTTACCC AGGAAGGTTT GAGTAGCTTA GACACTGCAT CCGGTTCGGG CAAGCTGGGA ACCGGCAAAC CAGAAACCGG CAGGCTATCC ACAAATCTTG CCCGGGATGT TCAAATCATC GTTCTGCCGG AAATCATTCC GGTTCAGGAA GCGCTGTTCT TGCAAACCTC TGTCTTAACT ATCCCTCTGA GCGGATCCTT AGGTACTCCC AAACGCTGGG AGCTATCTTT AGAGATCACC AACCTCAGCA ATGAGGTGAT CCGCACTATC CTGGTCACCG ATACTATCCT GCTTGATGAA TTTAAGTGGA CGGACACGGT CTTTGTCTCC TCAGGGGAGG TGGCCACCGC CCATAATACC CTGCTCTGGA CTATAGAAGA GCTCTTGCCC GGCAGAACCC TAACCGCCCG GTTTGCAGTC GAAGGGCTTT TTAATACCAC CGGCCTGCGT TCGCTCAGCA GGGCTGTCGC CTCAGGATGG AGTCTGAATT CTTGTGTACT GTCCAACATT GCTTCCGGAG CACTCATCCG CATCTCAGGC TATATTTTTG CTTGTGTTAT TGTCGACAAA GTCTTTTCTC AGTGTCAGGA TCGGTACTGC TTTGAAGATA TAGCCCTCCC CATCTCCGCT TTTCAGAGGA TTCTCTTTAA ACCGGGACGT ATTATGGAAG ACACTCTGGA GATCACTGCT ATAAGAGATC GCCCCAATTT TAAAAGAGTT CAATTCCTTT TAAAGATACC CTTTACAATC GTTGCCGGAG GCACGACGCT GGGCCAGGAC TCTCTGCCCC CTATCCCTAT GGACCTCATC ATGTTCATGC CGGAACCACG GGATGAGTTT TCTTATGATG TTGTGGTGGA AACCCGTTCT GAGCTGCTCG GCTCTCCCGA CGGTTGTGAG GAAGGCCGGC ATTGTACCGT AGGGGTATTT ATCGTGATCA AAGCCGTGGG CAAAGTACAG TTATTGATCC CCAGCCTGGA GGTTGATCCT GAGCCTCCCC TGTGCGAGGA GTTTTTGCCG AATCAGCTCT GCGCTGGTTT TAAAACAGTG GTTTTCCCGG ATTTTTATCC TTCGCAAAAT ACGGTGCAAA GTAGTTTTCA GGACAGACTC CAAGATAAGC TCCAGACGAT ACTCTCACCC CCTAACCCTC CGGCTCAGCT CAGGGAAGCT CTCCCCTGCC CCCCGGTCTT CGGCAACCTG ACTCTGGAAA AATACATCAC AGCAGGACCT TCAGTAGTAA ATCCTCAAAC GAATGGTACC TGGACCATCG AAATTAAGCT TATCAATGAC GGTTATGGTC CGGTCAGCAA TGTGGTTATG AGCGATACCA TACTGGCAGA TAGCTTAGCC GTCATTAACG TCCTCAGCCT TACCCAAGGC ACAGTATTTC AAGAGGAGAA TAAGTTGCTC TGGGATATCG GGACCCTCAA TTCAATGGAC ACCGTTGTTT TGGCGGCAGA GGTAACAGGT TCTTTTAATG CCCAAACCAG TGCACTTCTC CAAGGCGAAA ACCAACAGTA CAATGCACTT GCCGATGGAG TTAAGACTGC TTTTACCGAC AATGATGAGT TGCTCATCTA CGGCAATCAG GGAATACCCG ACCCTAGGGA AATTTCCTTT ATTAATCTTT ATATCAATGG GGTATTGCAG CCTCAAACTA ACTATAAAGT AAGGCCAGGA CTTCTCATCC TGACCGTAGA CAGCCCTCCC CAAAAGGGAG TCCCCGTTAT TCTTGAATCA CTGATTATCA GGGACAGCAA GGATACTCTT TTAAAAGCGG AACTCTATCA ATACAACACT CGGGCCAATG GTCAAAGAGA GTATACCAAT GCCGATGAAA TAACCATGTA CGGTGATCAA GGAATCCTCG CCCCTCAGCA AACTTCTTAT CACTACCTCT TTATCAATGG AGTTATCCAG CCTAAAAGCA ATTATACCCT TGAAAAAGGT CTCCTTACCC TGAAGGTTGC CCACCTGCCT CTGGAAGGAG TACCCATGTC CATCCAGTTT GTTTCTTTAT ATTCATGA
|
Protein sequence | MFKEEIGFNP TKKLLTAEAY QYNARSDGIK KVYTNDDEIK EYGDQGILDP HQVSYFNLFI NGVLQPKVNY ELHEGLLVLK TEDAPLQGSP IIITFVTFRD EEPALLNSAL AEGILPSGQL SRGPVTDRGI EVSDTARPDL KLEKLTLSGP ESLAAGQAAT WVFTITVSNQ GALPIRDIVV REFILLDSVL AIETLSLSQG DLALDDDLIT WTIDHLNPEE SAAASFRVEG LFKAAGTRFL SRGSATGRSS AAAVRTDIIG AGPVAVSKGL ELTNTILSGP TQVTRGQTCT WRVELKLTNL SGVELSDLLV TDTLLIENIS NVNVVSISHG DAHLVNREIH WSLTGLKPLE MAVLALDITG SFTQEGLSSL DTASGSGKLG TGKPETGRLS TNLARDVQII VLPEIIPVQE ALFLQTSVLT IPLSGSLGTP KRWELSLEIT NLSNEVIRTI LVTDTILLDE FKWTDTVFVS SGEVATAHNT LLWTIEELLP GRTLTARFAV EGLFNTTGLR SLSRAVASGW SLNSCVLSNI ASGALIRISG YIFACVIVDK VFSQCQDRYC FEDIALPISA FQRILFKPGR IMEDTLEITA IRDRPNFKRV QFLLKIPFTI VAGGTTLGQD SLPPIPMDLI MFMPEPRDEF SYDVVVETRS ELLGSPDGCE EGRHCTVGVF IVIKAVGKVQ LLIPSLEVDP EPPLCEEFLP NQLCAGFKTV VFPDFYPSQN TVQSSFQDRL QDKLQTILSP PNPPAQLREA LPCPPVFGNL TLEKYITAGP SVVNPQTNGT WTIEIKLIND GYGPVSNVVM SDTILADSLA VINVLSLTQG TVFQEENKLL WDIGTLNSMD TVVLAAEVTG SFNAQTSALL QGENQQYNAL ADGVKTAFTD NDELLIYGNQ GIPDPREISF INLYINGVLQ PQTNYKVRPG LLILTVDSPP QKGVPVILES LIIRDSKDTL LKAELYQYNT RANGQREYTN ADEITMYGDQ GILAPQQTSY HYLFINGVIQ PKSNYTLEKG LLTLKVAHLP LEGVPMSIQF VSLYS
|
| |