| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dhaf_2186 |
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| Symbol | |
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| ID | 7259155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfitobacterium hafniense DCB-2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011830 |
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| Strand | + |
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| Start bp | 2357430 |
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| End bp | 2359619 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643562076 |
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| Product | CRISPR-associated HD domain protein |
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| Protein accession | YP_002458656 |
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| Protein GI | 219668221 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1203] Predicted helicases |
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| TIGRFAM ID | [TIGR01596] CRISPR-associated endonuclease Cas3-HD |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTACT ACGCGCACAG TCGCAAAGAC GACATCCCTG AGCAGACGTA CGCGGAGCAT
GTTTGTGGTG TAAGGTCGTG GGGCCGCGAT TATGTTCAGG AGATAAGCTG CTATGCAAAA
TGTGATAATA CACTGCTGTC ACAGATTATA GAAAAAGCGT CCACCATTCA TGATCTGGGC
AAACTGAATA AGAAAAATCA GGATGTACTT GCCGGGAGAG AGCAGGATGA AAAGCTTCCG
GTACATCATT GGGACGCGGG AGCAGCCTAT TTTCTGAGAA ACAGCCATTT GTCTGTTTTT
TCCGCCGCTG TAATCCAGGC TCACCACAAG GGTTTTCCTG ATTTTACTGT CGAAGTGGAG
AGGGACGATG CGGCTTTTCG AGATAGAGCC ATTGCGTCTG AGGTGGATAA AGAGCTGCCG
GAGCTTGAAG CCATCCATAA CAACCTCGTT GACAGCCGGT TTGAGTATGA TAGGGAGGAA
ATCAAGGGAG ATAAATCAGT TTTCCTGCGG ATGCTCTTAT CATGCCTCGT CGATGCGGAC
CACACCGATA CGGCCATCCA TTACCGGAAG TATCCGGCGG AAATGAGCCC GGTCAGATTG
CGCGCCGCGG AACGGCTTGC CCAATTAGAC CGGCATATTG CCGGGCTGAA GCAAACAGGA
GCTGATGATG CTCGGAATGC TTTACGCAAT GAGATGTATT TAGCGTGTCG AAATGCTGAC
ATCGATGCCG GTATAACTTC CTGTGACAGC CCGGTTGGCT CCGGAAAGAC GACGGCGATC
ATGGCTCATT TGCTTGCACA GGCAGAGAAG CGAGGGTTGC GGCGTATCTT TGTTGTACTG
CCTTTTACAA ATATCATTAA ACAATCCGTC GATATCTATC GGAAGACACT TGTTTTGCCG
GGGGAAAACG CTGAGGAGGT CGTAGCGGAA CTGCATCACC GGGCAGACTT TGAGAGCAAG
GACGCCAGAC ACCTGACCGC GCTATGGCGA GCGCCCATTA TTGTGACAAC GGCTGTTGCT
TTTTTTGAAA CGCTGGCCTC GAATTCCACC GCGGCCCTGC GCCGCTTGCA TGAATTACCC
GGCAGTGCTG TTTTTGTGGA TGAATCCCAT GCTGCGTTGC CGGCCAAACT GCTGCCTATT
GCCTGGAAGT GGATCAATGT TTATGCCGCG GAATGGAACT GCTACTGGGT TCTGGCGTCC
GGTTCGCTGA ATCGATTCTG GACAATACCG GAAATTATCG GCAACGAAAG TTTCCACCCT
GTACCAGAAA TCATTGACGA TGAACTGCGC AAACGCCTTG CGGTCTATGA AAACAATCGG
ATTTCTTATC ATTGTGATTT ATTCCCCAAA GGCACGGCGG AGCTTGCTCA ATGGATCAGC
GGTTTTCCGG GGCCGAGACT GGTTATCTTG AACACAGTTC AAAGTGCTGC TGTATTAGCG
GACTATTTTT CAGAGCACTT TGGCCGAGAA TGTGTGGAGC ATCTGTCTAC GGCTTTGACT
CCAAATGATC GGAGCAATAC TCTCGAACGG ATAAAAAAGC GCTTGATGGA TAAAAAGGAT
ACGAATTGGA CCCTGATCGC AACATCATGT ATTGAAGCCG GTGTAAATCT GTCTTTCAGA
ACTGGATTTC GTGAACTTGG CGCCTTGGTA TCGCTGCTGC AAGCTTCAGG GCGTGTCAAT
CGGGAAGGGG TTCTTGATAA TGCGGAGATG TGGACATTTT GTATTTTAGA AGATGGAATG
CTGAGGCTTA ATCCTGGTTT AAAAGAGGCC GCCGCTGTTC TTAAAAGGTT TTTTGAAGGG
AACAGTGCCA TTGTGCCGGA ATTGAGCACC CAATCCCTCA CTGATGAAAT CGCTTTATAT
GGGCTGTCTG GAAAACATAG AAACTTGGTC ACCAATGAGA AATTGCAAAA TTTTCGTAAG
GTAGAAGAGG ATTTCAAGGT AATTGACAGC GATACTCGTC TTGTAGTTGT TGACCCGAGT
ATGGCAAAAC GCTTGCAATA TGGAAAAGTC GATTGGAAAG AACTGCAAAA GGTCTCGGTT
CAAATTGCCA AATATAAATT GGATGAACTG AGAACGCCTA TGATCATGGA TAAAATATAC
AGGTGGAACC TGGAATACGA TGGCTTTCTC GGTTATATGG CTGGTATCGT GAAATTAAAA
AAGTATAGCG GAGGGGCAAT CATCATTTGA
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| Protein sequence | MIYYAHSRKD DIPEQTYAEH VCGVRSWGRD YVQEISCYAK CDNTLLSQII EKASTIHDLG
KLNKKNQDVL AGREQDEKLP VHHWDAGAAY FLRNSHLSVF SAAVIQAHHK GFPDFTVEVE
RDDAAFRDRA IASEVDKELP ELEAIHNNLV DSRFEYDREE IKGDKSVFLR MLLSCLVDAD
HTDTAIHYRK YPAEMSPVRL RAAERLAQLD RHIAGLKQTG ADDARNALRN EMYLACRNAD
IDAGITSCDS PVGSGKTTAI MAHLLAQAEK RGLRRIFVVL PFTNIIKQSV DIYRKTLVLP
GENAEEVVAE LHHRADFESK DARHLTALWR APIIVTTAVA FFETLASNST AALRRLHELP
GSAVFVDESH AALPAKLLPI AWKWINVYAA EWNCYWVLAS GSLNRFWTIP EIIGNESFHP
VPEIIDDELR KRLAVYENNR ISYHCDLFPK GTAELAQWIS GFPGPRLVIL NTVQSAAVLA
DYFSEHFGRE CVEHLSTALT PNDRSNTLER IKKRLMDKKD TNWTLIATSC IEAGVNLSFR
TGFRELGALV SLLQASGRVN REGVLDNAEM WTFCILEDGM LRLNPGLKEA AAVLKRFFEG
NSAIVPELST QSLTDEIALY GLSGKHRNLV TNEKLQNFRK VEEDFKVIDS DTRLVVVDPS
MAKRLQYGKV DWKELQKVSV QIAKYKLDEL RTPMIMDKIY RWNLEYDGFL GYMAGIVKLK
KYSGGAIII
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