Gene Dhaf_2148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2148 
Symbol 
ID7259117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp2312287 
End bp2312964 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content55% 
IMG OID643562038 
ProductABC transporter related 
Protein accessionYP_002458618 
Protein GI219668183 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.357033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTATTT TAAAAACAAC GGACCTGCGC AAATATTACG GCGAGGGTGA TACGGCTGTC 
CGCGCTCTGG ACGGGGTGAA CCTGGCGGTG GACAAGGGAG AGTTCGTCGC TGTGGTGGGC 
ACTTCCGGCA GCGGCAAATC CACTCTGCTC CATTTGCTGG GAGGGCTTGA CCGGCCCAGC 
GGCGGGACGG TTGCCGTGGA TGGCAAGGAA ATTTTCTCCC TGAAGGATGA AGAGCTGACA 
ATTTTCCGGC GGCGCAAGAT CGGCTTTGTC TTCCAGAGCT ATAACCTGGT GCCGGTGCTC 
AATATCTATG AGAACATTAT TTTACCCATC CAATTGGATG GCAATGAACC GGACGAGGAG 
TATGTGACCC GAATCGTTCA AACCTTGGGT TTGGAAAGCA AGCTGCAGAA TCTTCCCGGC 
CAGCTTTCCG GGGGCCAGCA GCAGCGGGTG GCCATCGCCA GAGCCATAGC AACCAAACCG 
GCCATTATCC TGGCCGATGA ACCCACCGGG AATCTGGACA GCAGAACCAG TCAGGACGTG 
ATGGGGCTTC TCAAAGTGAC CGGGGAAAAG TTCAGGCAGA CCATCGTCAT GATTACCCAT 
AATGAAGAAT TGGCCCAGCT GGCTGATCGG ATCATCCGCA TTGAGGATGG CAAAATAGCA 
GGTGGTGGGC GAACATGA
 
Protein sequence
MVILKTTDLR KYYGEGDTAV RALDGVNLAV DKGEFVAVVG TSGSGKSTLL HLLGGLDRPS 
GGTVAVDGKE IFSLKDEELT IFRRRKIGFV FQSYNLVPVL NIYENIILPI QLDGNEPDEE 
YVTRIVQTLG LESKLQNLPG QLSGGQQQRV AIARAIATKP AIILADEPTG NLDSRTSQDV 
MGLLKVTGEK FRQTIVMITH NEELAQLADR IIRIEDGKIA GGGRT