Gene Dhaf_2136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2136 
Symbol 
ID7259105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand+ 
Start bp2303058 
End bp2304053 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content44% 
IMG OID643562028 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_002458608 
Protein GI219668173 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTAA TTTTCTCAGG CGTACAGCCT AGTGGAACAA TCACCTTAGG GAATTATCTT 
GGTGCAATGA AAAACTTTAC AAGCTATCAA AATGAGCATG AGTGCTATTT CTGTATTGTC 
AATCAACATG CAATCACTGT TCCCCAAGAA CCTGAACAAC TCAGGAAAAA CAGCAGGAAT 
TTAGCCGCAC TGTATCTGGC AATCGGCCTG GACCCGGATA AAGTAACTTT ATTTATTCAA 
TCAGAAGTAG CTGAACATAC TAAATTGGGA TGGATCATGA CCACCTTAGC CACGATTGGC 
GAGCTTGAAC GGATGACTCA GTATAAGGAT AAAGCGCAGC GGCACGGCAA TGGCGATTCC 
ATCCCCGCCG GCTTGCTTAC CTATCCGCCC TTAATGGCTG CGGATATCCT GCTTTACCAA 
ACGGATTATG TGCCGGTTGG GGATGATCAA CGACAACACA TTGAAATAAC CAGAGATTTA 
GCCCAACGCT TTAACAGCCG TTATGGGGAA GCATTTAAAC TCCCTGCTAT TCATACCCGG 
GAAGTGGGCG CAAGAATTAT GTCCCTCCAG GAACCAAAGA AAAAGATGAG CAAATCGGAT 
GCCAATTCCC TGGCAACGCC TTATCTGCTT GACGAACCGG AAACAATCCT CAAAAAGATT 
AAACGGGCTC AAACTGATTC GGAAAACAAA ATTTACTATG ATCGAGAAGG TAAGGCCGGC 
ATATCGAATC TGATGGCCAT CTATTCTTTA ATTACTGATA AGTCCACAGA TGAAATCGAA 
CAACTATATG AGGGCAAGGG CTACGGTCAA TTTAAAAATG ACCTTGCCGA AGCCATTATT 
GAAACCACAC GTCCCATCCA GAAAAGGTAT TATGAATTTG TTCATAGTGA CTACCTCGAT 
CAAATATTGA CTGCCGGTGC AGCTAAAGCT GCCCGAAAAG CAGCAGCAAC GCTGAATAAA 
GTTGAATATC TGATGGGTTT ATCAAGGAAT TGCTGA
 
Protein sequence
MAVIFSGVQP SGTITLGNYL GAMKNFTSYQ NEHECYFCIV NQHAITVPQE PEQLRKNSRN 
LAALYLAIGL DPDKVTLFIQ SEVAEHTKLG WIMTTLATIG ELERMTQYKD KAQRHGNGDS 
IPAGLLTYPP LMAADILLYQ TDYVPVGDDQ RQHIEITRDL AQRFNSRYGE AFKLPAIHTR 
EVGARIMSLQ EPKKKMSKSD ANSLATPYLL DEPETILKKI KRAQTDSENK IYYDREGKAG 
ISNLMAIYSL ITDKSTDEIE QLYEGKGYGQ FKNDLAEAII ETTRPIQKRY YEFVHSDYLD 
QILTAGAAKA ARKAAATLNK VEYLMGLSRN C