Gene Dhaf_2127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2127 
Symbol 
ID7259096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2293629 
End bp2295422 
Gene Length1794 bp 
Protein Length597 aa 
Translation table11 
GC content52% 
IMG OID643562019 
ProductABC transporter related 
Protein accessionYP_002458599 
Protein GI219668164 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000126664 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGATT CAACAAACAA AAAAACCGGC GATATCCGCT GGTTATTGCA GCTGGCTGAA 
ACAAAGAAAG CCAACTTGCT CCTGGCCTGT TTGCTTTCCG TCTTCAGTGC GGCGCTGTCC
TTTGCACCGT ATGTTTGCGT GTATTTTATT CTTAGAGTCA TCCTGGAAAA CAGCGGAAAC
CTTGCAGGAA TATCCTTCAG CTCCGTGGGC ATTTACGCCT GGGTGGCACT GGGAACAGTC
ATCCTGGGAC TTTTGTTTTC TTTCCTTTCG TCGGTTCTTT CCCATGGAGC CGCCTATAAA
ATCCTGTTTG AGCTGCGTAT GAAATTTGCA GGGCACATTT CCCAGCTGCC CATGGGCTTT
CATACCAGCA ATTCGACGGG AAAGCTGCGT AAGCTGATGG ATGAAAATGT GGAGAAGCTC
GAACTCTTTA TCGCCCACCA GCTCCCGGAT GCAGTGGGTT CCTTAGCTTC TCCGGTCGTA
ATGCTGGTCG TATTATTCCT GTTCGACTGG AGAATGGGGC TGGCCTGCCT TGTACCCATC
GTGCTGAGCT TTATGGCCCA GGCCGGCAGC TTAGCCAACC CCGAATCAAA AGAATTTATG
GAGAGCTTCC AGGATTTGCA GGATAAAATG AACAGCTCGG CTGTGGAATA TGTGCGGGGA
ATTTATGTGG TCAAGGCCTT CAATCAAACG GTGTTTTCTT TCCGCAAATT CCACGATACC
ATCCTGGCCT ATAAGGACAG CGCCATCCGC TATACCCACT CGGTAAAAAA CTCCTATTGC
GCTTTCCTCG TCCTGCTCAA TTCGGTGTTT CTGTTTCTGC TGCCGGTAGG AATCCTGATT
GGCAGCCGCG CCGCCGATTA CCAGGCCTTT GCCATAGCTT TCCTGTTCTA CCTGATTTTC
AGCATGGGCA TTGCCGGGCC GGTGTCAAAG CTGATGTATG TGTTCGTGCA GGGTTTTATG
GTATCGTCGA GCATCAAGCG GGTGCGGGGC GTATTTGATA CGCCGGTACT CAGCGTTGGG
GTGAATCGGG AAAAACCCCG GGGGAACGGC ATTTCCTTTG AGCATGTTTT CTTCTCCTAT
AACAAAGACG ATGCAAAGGG GACCCTCCAT GATATCAGCT TCACGGCGGA GCCGGGGCAG
GTGACGGCGC TGGTGGGGCC TTCGGGCAGC GGAAAAAGCA CCATTGCTCA GCTTATCCCC
CGGTTTTGGG ATATTGACAG CGGCCAAATC GCTATAGGCG GCGTCAATAT CACCGATATA
GCCCTTGACG ACCTGATGCA ATCGGTCAGC TTTGTTTTTC AGGACGTCTT CCTTTTCCAG
AAAAGTATTC TGGAAAACAT TAAGATCGGC AATGAAACCG CCAGCGATGA GGATGCTGTG
TGGGCGGCAA AGGCCGCCAT GTGCCACGAA TTTATCGAGC GCCTGCCGGA TGGATACCAT
TCCGTATTGG GCAGCAAAGG CACTTACCTT TCGGGCGGGG AGCGCCAGCG CGTCGTCATC
GCGCGGGCTA TTTTGAAGAA TGCTCCCATT GTCATACTGG ATGAAGCCAC CGCCTTTGCT
GACCCGGAAA ATGAACAGAA AATCCAGCTG GCTCTGGAAA AGCTGATGAA GCATAAAACC
GTCATTGTCA TCGCTCACCG CCTGTCCACC ATCAAAAACG CCGATAAGAT CATCGTCGTG
GACGAGGGGC GGATCGCCGA ACAAGGCACC CATGAGGAAC TGATCCGATA TGGCGCCAAG
TACGGGCACA TGTGGGACGT TTACAGCAAA GCCCTTAACT GGAAGCTGGC CTAA
 
Protein sequence
MSDSTNKKTG DIRWLLQLAE TKKANLLLAC LLSVFSAALS FAPYVCVYFI LRVILENSGN 
LAGISFSSVG IYAWVALGTV ILGLLFSFLS SVLSHGAAYK ILFELRMKFA GHISQLPMGF
HTSNSTGKLR KLMDENVEKL ELFIAHQLPD AVGSLASPVV MLVVLFLFDW RMGLACLVPI
VLSFMAQAGS LANPESKEFM ESFQDLQDKM NSSAVEYVRG IYVVKAFNQT VFSFRKFHDT
ILAYKDSAIR YTHSVKNSYC AFLVLLNSVF LFLLPVGILI GSRAADYQAF AIAFLFYLIF
SMGIAGPVSK LMYVFVQGFM VSSSIKRVRG VFDTPVLSVG VNREKPRGNG ISFEHVFFSY
NKDDAKGTLH DISFTAEPGQ VTALVGPSGS GKSTIAQLIP RFWDIDSGQI AIGGVNITDI
ALDDLMQSVS FVFQDVFLFQ KSILENIKIG NETASDEDAV WAAKAAMCHE FIERLPDGYH
SVLGSKGTYL SGGERQRVVI ARAILKNAPI VILDEATAFA DPENEQKIQL ALEKLMKHKT
VIVIAHRLST IKNADKIIVV DEGRIAEQGT HEELIRYGAK YGHMWDVYSK ALNWKLA