Gene Dhaf_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_2117 
Symbol 
ID7259086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp2284970 
End bp2285704 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content51% 
IMG OID643562009 
ProductABC transporter related 
Protein accessionYP_002458589 
Protein GI219668154 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.101378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCAAC CGCATTGCAT TGTTTTGCGT AAGGTCAATA AATTCTTTGG CAAAAAGCAT 
GTCCTCAAAG AGATTGACCT GGAAATTCCC TATGGCCATA TCTACGGCTT GCTGGGCCCT
TCCGGCTGCG GCAAAACCAC CATCGTGAAA ATAATTGCAG GGATACTGGA AGCTACTTCC
GGCGAAGCCT ATGTCCTCGG TGAAAGGATG CCCCGGCTGA GCTTAATGAA CAAGGTAGGG
TATATGGCTC AGTCCGATGC TCTCTATGGT ACCTTAACCG CAGCGGAAAA TCTGCAGTTT
TTTGGGGCCA TTTATGGCAT GGGCAAGGGA GAGATCAAAA AACGGACGGC GGAAGTCATG
GAGTTGGTCA ATCTTACCGA ACACCTCCAC AAACCGGTCC AGGCTTTTTC CGGCGGAATG
AAACGGCGGC TTTCCCTGGC TATGGCTGTT ATGCACAACC CGCCGGTGCT GGTTTTGGAT
GAACCTACGG TAGGGATCGA CCCACTTTTA AGGAGAACGA TCTGGGCGGA ATTAAACACC
TTGGCCAGGC AAGGGATTAC GATCCTGGTC ACAACCCATG TCATGGATGA AGCGGATAAA
TGCCACAGCC TTGCTATGAT GCGGGATGGA CGCCTGATCG CTAAGGGCAC TTCCCGGGAG
CTGCAGGATA GGATCGGTGT CAACGACATC GAAGAAGCTT TCATCTATTA TGGAGGACAA
CAGGATGAGA GTTAG
 
Protein sequence
MEQPHCIVLR KVNKFFGKKH VLKEIDLEIP YGHIYGLLGP SGCGKTTIVK IIAGILEATS 
GEAYVLGERM PRLSLMNKVG YMAQSDALYG TLTAAENLQF FGAIYGMGKG EIKKRTAEVM
ELVNLTEHLH KPVQAFSGGM KRRLSLAMAV MHNPPVLVLD EPTVGIDPLL RRTIWAELNT
LARQGITILV TTHVMDEADK CHSLAMMRDG RLIAKGTSRE LQDRIGVNDI EEAFIYYGGQ
QDES